RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 COQ5Q5HYK3 327 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 C1orf146Q5VVC0 180 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 LIPJQ5W064 366 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3GQ6DHY5 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3CQ6IPX1 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3Q8IZP1 549 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 KLK6Q92876 244 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZDHHC5Q9C0B5 715 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 DCLRE1BQ9H816 532 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 FARSBQ9NSD9 589 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC23A2Q9UGH3 650 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRKAB1Q9Y478 270 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 NR5A2O00482 541 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 MRASO14807 208 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRAMEF4O60810 478 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 PDE5AO76074 875 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACADMP11310 421 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 SRFP11831 508 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 JUPP14923 745 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 IGFALSP35858 605 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 NME5P56597 212 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZNF33BQ06732 778 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 DMPKQ09013 629 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 CHIT1Q13231 466 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 MAD2L1Q13257 205 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 RCAN2Q14206 197 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRAMEF9Q5VWM5 478 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 METRNLQ641Q3 311 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ICE2Q659A1 982 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR9A1PQ8NGU1 263 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ROPN1LQ96C74 230 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 MED8Q96G25 268 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC52A3Q9NQ40 469 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ITM2CQ9NQX7 267 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 GPRC5BQ9NZH0 403 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZNHIT2Q9UHR6 403 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 NDUFAF1Q9Y375 327 aa11.12□□□□□ -0.63
SMARCAL1-203ENST00000392128 NPIPB8E9PQR5 432 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC22A3O75751 556 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PDYNP01213 254 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 NDUFV2P19404 249 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 CAPN3P20807 821 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRPH2P23942 346 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 HALP42357 657 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 GNPDA1P46926 289 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PPP2CBP62714 309 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PPP2CAP67775 309 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 SMAD2Q15796 467 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 IMPG1Q17R60 797 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 RFTN2Q52LD8 501 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PIGGQ5H8A4 983 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 C8orf82Q6P1X6 216 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 RGL4Q8IZJ4 473 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZNF480Q8WV37 535 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 SELENOMQ8WWX9 145 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR4K3Q96R72 315 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ASIC5Q9NY37 505 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC17A4Q9Y2C5 497 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PCDHGA7Q9Y5G6 932 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 DPP6P42658 865 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 RGS19P49795 217 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PSME3P61289 254 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 IRF8Q02556 426 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 E2F2Q14209 437 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 IL23RQ5VWK5 629 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 FRG2Q64ET8 278 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 CAPN13Q6MZZ7 669 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 KIAA1324Q6UXG2 1013 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZFAND4Q86XD8 727 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 PROKR1Q8TCW9 393 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 STMN2Q93045 179 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 FRG2BQ96QU4 278 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 LRTM1Q9HBL6 345 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 TM7SF3Q9NS93 570 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 POMPQ9Y244 141 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
SMARCAL1-203ENST00000392128 A0A1W2PP18 115 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 DYTNA2CJ06 578 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 E7EQ34 232 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SOX1O00570 391 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 ANGPT2O15123 496 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 RSL1D1O76021 490 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 PSMG1O95456 288 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms