RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 DNAAF2Q9NVR5 837 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 STOML2Q9UJZ1 356 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 TRBV5-4A0A0C4DH59 114 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 TEX28O15482 410 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 SMAD6O43541 496 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 WDR47O94967 919 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 CLDN7O95471 211 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 ITGALP20701 1170 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 ACRV1P26436 265 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 TMBIM6P55061 237 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 AP1S1P61966 158 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 PHC1P78364 1004 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 PON2Q15165 354 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 CDKN3Q16667 212 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 ZC3H7AQ8IWR0 971 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 CHDHQ8NE62 594 aaPredicted RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 MIPOL1Q8TD10 442 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 UBTD2Q8WUN7 234 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 HDAC2Q92769 488 aaKnown RBP13.53□□□□□ -0.24
NEK4-202ENST00000383721 BHMTQ93088 406 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 SAMD11Q96NU1 681 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 LHPPQ9H008 270 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 ASIC5Q9NY37 505 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 TRPS1Q9UHF7 1281 aa13.53□□□□□ -0.24
NEK4-202ENST00000383721 CARNS1A5YM72 827 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 SCELO95171 688 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 TRBC1P01850 177 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 HTR1AP08908 422 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 EBLN1P0CF75 366 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 BPIP17213 487 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 CCNA2P20248 432 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 CHRNA6Q15825 494 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 MEP1AQ16819 746 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 IMPG1Q17R60 797 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 CTU2Q2VPK5 515 aaKnown RBP13.52□□□□□ -0.24
NEK4-202ENST00000383721 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.24
NEK4-202ENST00000383721 SPESP1Q6UW49 350 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 TMEM179BQ7Z7N9 219 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.24
NEK4-202ENST00000383721 PLPP6Q8IY26 295 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 MICU2Q8IYU8 434 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 SPARTQ8N0X7 666 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 BPIFB6Q8NFQ5 453 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 USP7Q93009 1102 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 OR52E6Q96RD3 313 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 SLC22A12Q96S37 553 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 KAT8Q9H7Z6 458 aaKnown RBP13.52□□□□□ -0.24
NEK4-202ENST00000383721 INVSQ9Y283 1065 aa13.52□□□□□ -0.24
NEK4-202ENST00000383721 NOL3O60936 208 aaKnown RBP13.52□□□□□ -0.25
NEK4-202ENST00000383721 TFPTP0C1Z6 253 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 BCKDHAP12694 445 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 EPB42P16452 691 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 HNF1BP35680 557 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 NRIP1P48552 1158 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 KCNAB2Q13303 367 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 SKIV2LQ15477 1246 aaKnown RBP13.52□□□□□ -0.25
NEK4-202ENST00000383721 C6orf141Q5SZD1 244 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 GTF2IRD2BQ6EKJ0 949 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 LAIR2Q6ISS4 152 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 MACC1Q6ZN28 852 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 GCNT7Q6ZNI0 430 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 GTF2IRD2Q86UP8 949 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 SVOPLQ8N434 492 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 MTFMTQ96DP5 389 aaKnown RBP13.52□□□□□ -0.25
NEK4-202ENST00000383721 CSF3RQ99062 836 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 SH3GL1Q99961 368 aa13.52□□□□□ -0.25
NEK4-202ENST00000383721 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
NEK4-202ENST00000383721 GLYATL1P3A0A0U1RQE8 302 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 A8MX80 341 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 GNGT2O14610 69 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 PER2O15055 1255 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 CREG1O75629 220 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 EPORP19235 508 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 PRKACGP22612 351 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 MAP4P27816 1152 aaKnown RBP13.51□□□□□ -0.25
NEK4-202ENST00000383721 GSTM2P28161 218 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 GZMMP51124 257 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 CD47Q08722 323 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 ADGRD2Q7Z7M1 963 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 MRPL43Q8N983 215 aaKnown RBP13.51□□□□□ -0.25
NEK4-202ENST00000383721 SMYD1Q8NB12 490 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 BORCS5Q969J3 196 aa13.51□□□□□ -0.25
NEK4-202ENST00000383721 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms