RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.05
VLDLR-202ENST00000382099 CIDECQ96AQ7 238 aaPredicted RBP14.71□□□□□ -0.05
VLDLR-202ENST00000382099 OPALINQ96PE5 141 aa14.71□□□□□ -0.05
VLDLR-202ENST00000382099 NSMCE4AQ9NXX6 385 aa14.71□□□□□ -0.05
VLDLR-202ENST00000382099 ING4Q9UNL4 249 aa14.71□□□□□ -0.05
VLDLR-202ENST00000382099 NRXN2Q9P2S2 1712 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 GNPDA1P46926 289 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 CSTF3Q12996 717 aaKnown RBP14.71□□□□□ -0.06
VLDLR-202ENST00000382099 SPP2Q13103 211 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 ATP6AP1LQ52LC2 224 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 BHLHB9Q6PI77 547 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 FAM183BPQ6ZVS7 135 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 C9orf62Q8N4C0 152 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 ATG16L2Q8NAA4 619 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 C19orf18Q8NEA5 215 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 ZNF566Q969W8 418 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 RIT2Q99578 217 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 PAK6Q9NQU5 681 aaPredicted RBP14.71□□□□□ -0.06
VLDLR-202ENST00000382099 MIOSQ9NXC5 875 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 MALT1Q9UDY8 824 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 TRHDEQ9UKU6 1024 aa14.71□□□□□ -0.06
VLDLR-202ENST00000382099 A0A087WZ62 844 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 C2CD4BA6NLJ0 364 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 YKT6O15498 198 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 MICAL2O94851 1124 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ALPPP05187 535 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 GOT1P17174 413 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RAB3AP20336 220 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 GPC1P35052 558 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ZNF81P51508 661 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RPL6Q02878 288 aaKnown RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 CBLBQ13191 982 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 DMC1Q14565 340 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PTPRCAPQ14761 206 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 VEPH1Q14D04 833 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 GRIK4Q16099 956 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 TUSC1Q2TAM9 212 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 GNASQ5JWF2 1037 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 SLC46A3Q7Z3Q1 461 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 SP8Q8IXZ3 490 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ZNF567Q8N184 647 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PNPLA1Q8N8W4 532 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 DIRAS2Q96HU8 199 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ALG9Q9H6U8 611 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 DNAJC15Q9Y5T4 150 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ADGRA2Q96PE1 1338 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 SMIM30A4D0T7 59 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 LINC00587B1AMM8 73 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PLOD3O60568 738 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PSIP1O75475 530 aaKnown RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ATP4BP51164 291 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 CRISP3P54108 245 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 FOXA1P55317 472 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 FOXM1Q08050 763 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 CDH18Q13634 790 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 DSG2Q14126 1118 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RFX4Q33E94 735 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RETSATQ6NUM9 610 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 CYHR1Q6ZMK1 362 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PM20D2Q8IYS1 436 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 PYROXD2Q8N2H3 581 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 TNIP3Q96KP6 325 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ZNF670Q9BS34 389 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 NXF2Q9GZY0 626 aaKnown RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 FABP12A6NFH5 140 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 LZTS3O60299 673 aaPredicted RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RNGTTO60942 597 aaKnown RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 DIRAS1O95057 198 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ALDH1A1P00352 501 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 JUNDP17535 347 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 EXOSC2Q13868 293 aaKnown RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RGMBQ6NW40 437 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 TMEM179Q6ZVK1 233 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 SLC26A9Q7LBE3 791 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 RDH10Q8IZV5 341 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 NXPE3Q969Y0 559 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 MCCC1Q96RQ3 725 aaPredicted RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 ELF5Q9UKW6 265 aaPredicted RBP14.7□□□□□ -0.06
VLDLR-202ENST00000382099 SESN1Q9Y6P5 492 aa14.7□□□□□ -0.06
VLDLR-202ENST00000382099 F8W036 122 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 H3BM21 787 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 SLC16A6O15403 523 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 NDUFS6O75380 124 aaKnown RBP14.69□□□□□ -0.06
VLDLR-202ENST00000382099 IFNA7P01567 189 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 CD72P21854 359 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 ARL4AP40617 200 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 HUNKP57058 714 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 TOR1AIP1Q5JTV8 583 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 TIGD3Q6B0B8 471 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 B3GNT9Q6UX72 402 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 GPAT4Q86UL3 456 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 DENND1CQ8IV53 801 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 SLC9A6Q92581 669 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 BARD1Q99728 777 aaKnown RBP14.69□□□□□ -0.06
VLDLR-202ENST00000382099 PIP5K1AQ99755 562 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 UBQLN2Q9UHD9 624 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 RAB23Q9ULC3 237 aa14.69□□□□□ -0.06
VLDLR-202ENST00000382099 EDARQ9UNE0 448 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms