RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 CLCA3PQ9Y6N3 262 aa14.59□□□□□ -0.07
SNPH-202ENST00000381873 A0A1W2PQ45 241 aaPredicted RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 A0A1W2PQY0 241 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 TCF4P15884 667 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 AHSA2Q719I0 299 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 DCAF4L2Q8NA75 395 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 TMEM145Q8NBT3 493 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 GTPBP3Q969Y2 492 aaKnown RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 TRIM2Q9C040 744 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 PIGUQ9H490 435 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 SLC32A1Q9H598 525 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 IRS2Q9Y4H2 1338 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 ITGB4P16144 1822 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 NAV1Q8NEY1 1877 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 CPED1A4D0V7 1026 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 GADD45GO95257 159 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 TYRP14679 529 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 ATP5A1P25705 553 aaKnown RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 MAGEA11P43364 429 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 NFKB2Q00653 900 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 SLC39A4Q6P5W5 647 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 ZCCHC12Q6PEW1 402 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 FAM110BQ8TC76 370 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 TFGQ92734 400 aaPredicted RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 GPATCH1Q9BRR8 931 aaKnown RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 CCM2Q9BSQ5 444 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 ZNF358Q9NW07 568 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 C4AP0C0L4 1744 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 LOC110117498-PIK3R3F6TDL0 507 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 SIX3O95343 332 aaPredicted RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 TGFB1P01137 390 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 SOD2P04179 222 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 CFHP08603 1231 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 HOXC12P31275 282 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 ARRB1P49407 418 aaPredicted RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 HMGCS1Q01581 520 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 INCA1Q0VD86 236 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 EIPR1Q53HC9 387 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 RALGPS1Q5JS13 557 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 NATD1Q8N6N6 113 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 TSEN15Q8WW01 171 aaKnown RBP14.58□□□□□ -0.08
SNPH-202ENST00000381873 NPY6RQ99463 290 aa14.58□□□□□ -0.08
SNPH-202ENST00000381873 C9J4A7 227 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 AHCYL1O43865 530 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 NRLP54845 237 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 EOGTQ5NDL2 527 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNPH-202ENST00000381873 FRG2Q64ET8 278 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 PLET1Q6UQ28 207 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 LAPTM4BQ86VI4 370 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 CAMKVQ8NCB2 501 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SLCO2A1Q92959 643 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 C11orf24Q96F05 449 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 FRG2BQ96QU4 278 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 DENND2DQ9H6A0 471 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 GLI3P10071 1580 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 TIAM2Q8IVF5 1701 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 TCEA3O75764 348 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 CLDN7O95471 211 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 HOXB2P14652 356 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 POU2F1P14859 743 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 NCK1P16333 377 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 CBX5P45973 191 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 BCAP31P51572 246 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 NCBP2P52298 156 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNPH-202ENST00000381873 LACTB2Q53H82 288 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 GALNT7Q86SF2 657 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 ADGRG6Q86SQ4 1221 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SVOPLQ8N434 492 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 RGMAQ96B86 450 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 CHID1Q9BWS9 393 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 PLEKHA1Q9HB21 404 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 POLE3Q9NRF9 147 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 THUMPD1Q9NXG2 353 aaKnown RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 ATXN10Q9UBB4 475 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 B4DGG1 531 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 DHFRP00374 187 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 ZNF823P16415 610 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 TCEA1P23193 301 aaKnown RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 AHCYP23526 432 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 NRIP1P48552 1158 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 MTPNP58546 118 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 OC90Q02509 493 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 LY6G5CQ5SRR4 150 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 ZDHHC24Q6UX98 284 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SLCO6A1Q86UG4 719 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 ZNF483Q8TF39 744 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 SHISA4Q96DD7 197 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 CAMK1GQ96NX5 476 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 SMURF2Q9HAU4 748 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 TTC24A2A3L6 582 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 SLC22A2O15244 555 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 ERI3O43414 337 aaKnown RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 ECI2O75521 394 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 RBMXL2O75526 392 aaKnown RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 ATP1B2P14415 290 aaPredicted RBP14.57□□□□□ -0.08
SNPH-202ENST00000381873 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
SNPH-202ENST00000381873 FAM131AQ6UXB0 335 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms