RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ING5Q8WYH8 240 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 DCSTAMPQ9H295 470 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 IRS2Q9Y4H2 1338 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 E9PAM4 449 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 H3BM21 787 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 M0QX08 132 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 KDM4BO94953 1096 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ACSL1P33121 698 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 DNAJB7Q7Z6W7 309 aaPredicted RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 TMEM192Q8IY95 271 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 DNAJA4Q8WW22 397 aaPredicted RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 EXOSC8Q96B26 276 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 FKBP7Q9Y680 259 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 SCN7AQ01118 1682 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 C2CD4BA6NLJ0 364 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 OR4Q2P0C623 313 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 CKMT2P17540 419 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 MAGEA2P43356 314 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 SLC18A1P54219 525 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.22
SNPH-201ENST00000381867 DSC2Q02487 901 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 NAE1Q13564 534 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 C17orf99Q6UX52 265 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 SNX20Q7Z614 316 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 COMMD4Q9H0A8 199 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 ZDHHC4Q9NPG8 344 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 IFT46Q9NQC8 304 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.22
SNPH-201ENST00000381867 ANXA2P2A6NMY6 339 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 PER2O15055 1255 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 SERPINA3P01011 423 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 ANXA2P07355 339 aaKnown RBP13.71□□□□□ -0.22
SNPH-201ENST00000381867 DEFA5Q01523 94 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.22
SNPH-201ENST00000381867 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 ZFAND2BQ8WV99 257 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 BCO2Q9BYV7 579 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 TMLHEQ9NVH6 421 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.22
SNPH-201ENST00000381867 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.22
SNPH-201ENST00000381867 NRP1O14786 923 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 MTHFD1P11586 935 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 ADAM8P78325 824 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 TIGD5Q53EQ6 642 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 FBXO48Q5FWF7 155 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 RANBP3LQ86VV4 465 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 PDLIM1O00151 329 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 MATN3O15232 486 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 IRAK2O43187 625 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 AKAP8O43823 692 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 GATBO75879 557 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 AP1S1P61966 158 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ZNF460Q14592 562 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 MOGQ16653 247 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 BEND7Q8N7W2 519 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 OR10H4Q8NGA5 316 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 STON2Q8WXE9 905 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ARNTL2Q8WYA1 636 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 AZIN2Q96A70 460 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 KCTD7Q96MP8 289 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 PRH1P02810 166 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 PRNPP04156 253 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 GPD2P43304 727 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ACADVLP49748 655 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 GDF10P55107 478 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 PPP3R1P63098 170 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 GALNTL5Q7Z4T8 443 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 SERINC5Q86VE9 423 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 HSPBAP1Q96EW2 488 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 HAPLN3Q96S86 360 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 RC3H2Q9HBD1 1191 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 ZNF282Q9UDV7 671 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 CHRNB2P17787 502 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 MAPK12P53778 367 aa13.7□□□□□ -0.22
SNPH-201ENST00000381867 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
SNPH-201ENST00000381867 GAD2Q05329 585 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms