RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CSF2P04141 144 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 LIPAP38571 399 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 GPR15P49685 360 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 BCL7AQ4VC05 210 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 CYP20A1Q6UW02 462 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 PTRH1Q86Y79 214 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 UTP15Q8TED0 518 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 RMDN1Q96DB5 314 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 THG1LQ9NWX6 298 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 KLHL20Q9Y2M5 609 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 M0R129 80 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 TLR5O60602 858 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MTHFD2P13995 350 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 AQP1P29972 269 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 IFNA8P32881 189 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 POLD2P49005 469 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ERVK-8P63133 956 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 FOXM1Q08050 763 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 CEP78Q5JTW2 689 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 SDHAF4Q5VUM1 108 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ZNF691Q5VV52 312 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 LYPD8Q6UX82 237 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 KRTCAP2Q8N6L1 136 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 OMA1Q96E52 524 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 L3HYPDHQ96EM0 354 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 APOL5Q9BWW9 433 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 OPTCQ9UBM4 332 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 FAM234BA2RU67 622 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SMIM30A4D0T7 59 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 AGAP5A6NIR3 686 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 CTDSP2O14595 271 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 EOMESO95936 686 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 B3GALT4O96024 378 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 GGT1P19440 569 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SREBF2Q12772 1141 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SPANXN4Q5MJ08 99 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MRNIPQ6NTE8 343 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ZNF549Q6P9A3 640 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 KDELC1Q6UW63 502 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 EFL1Q7Z2Z2 1120 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MON1AQ86VX9 555 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ZDHHC21Q8IVQ6 265 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ZNF583Q96ND8 569 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SMIM14Q96QK8 99 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ARNT2Q9HBZ2 717 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ATP13A1Q9HD20 1204 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 ACOT13Q9NPJ3 140 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 FBXO8Q9NRD0 319 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 TLR6Q9Y2C9 796 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 E5RI56 91 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 M0QX08 132 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 CKBP12277 381 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 AKT1P31749 480 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SNRPD2P62316 118 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 RAD51Q06609 339 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 DDR2Q16832 855 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 TIGD6Q17RP2 521 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 SETD9Q8NE22 299 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 REXO5Q96IC2 774 aaKnown RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 COPS4Q9BT78 406 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 DPY30Q9C005 99 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MMP28Q9H239 520 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 MUC13Q9H3R2 512 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 BPIFA1Q9NP55 256 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
SDC1-202ENST00000381150 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
SDC1-202ENST00000381150 IKZF3Q9UKT9 509 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms