RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SLC6A12P48065 614 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 CCT8P50990 548 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 ZP2Q05996 745 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 PARM1Q6UWI2 310 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 TRAM1L1Q8N609 369 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 FGF14Q92915 247 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 NSMCE2Q96MF7 247 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 SH3GL1Q99961 368 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 TRIM8Q9BZR9 551 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 DKK3Q9UBP4 350 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 LIMD1Q9UGP4 676 aa21■□□□□ 0.95
TRIM54-202ENST00000380075 TULP3O75386 442 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 SEC22BO75396 215 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 RSL1D1O76021 490 aaKnown RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 MTHFD1P11586 935 aaKnown RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 CKMT2P17540 419 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 EPORP19235 508 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 FCARP24071 287 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 NHSL2Q5HYW2 709 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 TANGO2Q6ICL3 276 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 MBOAT1Q6ZNC8 495 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 LIX1Q8N485 282 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 L3MBTL4Q8NA19 623 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 DDHD1Q8NEL9 900 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 MCOLN3Q8TDD5 553 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 OSCP1Q8WVF1 389 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 CCDC115Q96NT0 180 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ZSCAN5AQ9BUG6 496 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 LINC00597Q9H2U6 94 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 CLMPQ9H6B4 373 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 FARSBQ9NSD9 589 aaKnown RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ANKRD12Q6UB98 2062 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 SERTM1A2A2V5 107 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 SOCS2O14508 198 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ACPPP15309 386 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 DGKQP52824 942 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 SH3BGRP55822 239 aaPredicted RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 HMGCS1Q01581 520 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ZNF33BQ06732 778 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 BOP1Q14137 746 aaKnown RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ATP6AP1Q15904 470 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 SPRED1Q7Z699 444 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 ASZ1Q8WWH4 475 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 RSPRY1Q96DX4 576 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 MRGPRX3Q96LB0 322 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 PPM1MQ96MI6 270 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 FAM83CQ9BQN1 747 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 RPP25Q9BUL9 199 aaKnown RBP20.99■□□□□ 0.95
TRIM54-202ENST00000380075 PNPLA3Q9NST1 481 aa20.99■□□□□ 0.95
TRIM54-202ENST00000380075 DOCK8Q8NF50 2099 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 GMNNO75496 209 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 LEFTY1O75610 366 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 ASLP04424 464 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 SRPRAP08240 638 aaKnown RBP20.98■□□□□ 0.95
TRIM54-202ENST00000380075 PRPS2P11908 318 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 HRH2P25021 359 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 MAPK1P28482 360 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 WEE1P30291 646 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 PEX19P40855 299 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 APOFQ13790 326 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 MAPKAPK3Q16644 382 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 USP39Q53GS9 565 aaKnown RBP20.98■□□□□ 0.95
TRIM54-202ENST00000380075 TMEM215Q68D42 235 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 GLYATQ6IB77 296 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 HSD11B1LQ7Z5J1 315 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 KIAA1958Q8N8K9 716 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 SKA2Q8WVK7 121 aaPredicted RBP20.98■□□□□ 0.95
TRIM54-202ENST00000380075 LRRC3BQ96PB8 259 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 KXD1Q9BQD3 176 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 ABCG8Q9H221 673 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 RPF2Q9H7B2 306 aaKnown RBP20.98■□□□□ 0.95
TRIM54-202ENST00000380075 TRPV4Q9HBA0 871 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 DUS2Q9NX74 493 aaKnown RBP20.98■□□□□ 0.95
TRIM54-202ENST00000380075 IL36AQ9UHA7 158 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 CD84Q9UIB8 345 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 TMED5Q9Y3A6 229 aa20.98■□□□□ 0.95
TRIM54-202ENST00000380075 KCNE1BA0A087WTH5 132 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 SAC3D1A6NKF1 404 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 CDH1P12830 882 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 NCK1P16333 377 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PTGR1Q14914 329 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 HENMT1Q5T8I9 393 aaKnown RBP20.97■□□□□ 0.95
TRIM54-202ENST00000380075 KRT80Q6KB66 452 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 DET1Q7L5Y6 550 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 EPHX4Q8IUS5 362 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 RASGRP3Q8IV61 690 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 CBR4Q8N4T8 237 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 WFIKKN2Q8TEU8 576 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 SELENOMQ8WWX9 145 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 NCSTNQ92542 709 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 TFAP2CQ92754 450 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 GTF2H4Q92759 462 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 BIRC7Q96CA5 298 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 HAUS8Q9BT25 410 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 OSBPL6Q9BZF3 934 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 ELOVL6Q9H5J4 265 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 ZFP14Q9HCL3 533 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PCDH12Q9NPG4 1184 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 FBXO10Q9UK96 956 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PIKFYVEQ9Y2I7 2098 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms