RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 GBAP04062 536 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 JUPP14923 745 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 OTX2P32243 289 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 ACSL1P33121 698 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 PDSS1Q5T2R2 415 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 SH3PXD2AQ5TCZ1 1133 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 B3GNT6Q6ZMB0 384 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 FSTL5Q8N475 847 aaPredicted RBP13.84□□□□□ -0.19
TRIM13-202ENST00000378182 MIPEPQ99797 713 aa13.84□□□□□ -0.19
TRIM13-202ENST00000378182 GPATCH1Q9BRR8 931 aaKnown RBP13.84□□□□□ -0.19
TRIM13-202ENST00000378182 HDAC3O15379 428 aa13.83□□□□□ -0.19
TRIM13-202ENST00000378182 ERI3O43414 337 aaKnown RBP13.83□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF3P17036 446 aa13.83□□□□□ -0.19
TRIM13-202ENST00000378182 SNU13P55769 128 aaKnown RBP13.83□□□□□ -0.19
TRIM13-202ENST00000378182 LILRA4P59901 499 aa13.83□□□□□ -0.19
TRIM13-202ENST00000378182 SLC9B2Q86UD5 537 aa13.83□□□□□ -0.19
TRIM13-202ENST00000378182 HNRNPLLQ8WVV9 542 aaKnown RBP13.83□□□□□ -0.19
TRIM13-202ENST00000378182 SAR1AQ9NR31 198 aa13.83□□□□□ -0.19
TRIM13-202ENST00000378182 NOBOXO60393 691 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 FGF18O76093 207 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 EDNRAP25101 427 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SDC2P34741 201 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 OR12D2P58182 307 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 OCLNQ16625 522 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SLCO6A1Q86UG4 719 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 MREGQ8N565 214 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 GATSQ8NAP1 163 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SNX27Q96L92 541 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 CCNL2Q96S94 520 aaPredicted RBP13.83□□□□□ -0.2
TRIM13-202ENST00000378182 TAC3Q9UHF0 121 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 MAGEB17A8MXT2 336 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 GADD45GO95257 159 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 KCNJ2P63252 427 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 GBE1Q04446 702 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 TTC27Q6P3X3 843 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF548Q8NEK5 533 aaPredicted RBP13.83□□□□□ -0.2
TRIM13-202ENST00000378182 ZBED6CLQ96FA7 236 aaPredicted RBP13.83□□□□□ -0.2
TRIM13-202ENST00000378182 AGAP2Q99490 1192 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 AKR1D1P51857 326 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 NFKB2Q00653 900 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SNTA1Q13424 505 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 AAK1Q2M2I8 961 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 TRPV1Q8NER1 839 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 CPT1CQ8TCG5 803 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 DIRAS2Q96HU8 199 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 H3BUI4 141 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 KRT36O76013 467 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SLBPQ14493 270 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRIM13-202ENST00000378182 RBM44Q6ZP01 1051 aaKnown RBP13.83□□□□□ -0.2
TRIM13-202ENST00000378182 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 TGM7Q96PF1 710 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 RHOJQ9H4E5 214 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
TRIM13-202ENST00000378182 OR51F1A6NGY5 319 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 AIF1P55008 147 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 C6orf52Q5T4I8 152 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 MAGEL2Q9UJ55 1249 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 CYP3A7P24462 503 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RPS9P46781 194 aaKnown RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 UCK2Q9BZX2 261 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 FKBP14Q9NWM8 211 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 SLC30A4O14863 429 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 JUNP05412 331 aaKnown RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RB1P06400 928 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 POLR2CP19387 275 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 TAF1AQ15573 450 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.22e-6■■□□□ 11.5
TRIM13-202ENST00000378182 ZNF311Q5JNZ3 666 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 FAM182AQ5T1J6 154 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 UBQLNLQ8IYU4 475 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 YIPF7Q8N8F6 280 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RFKQ969G6 155 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 CIB4A0PJX0 185 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 PLD2O14939 933 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 PCDH7O60245 1069 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 SERPINA6P08185 405 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 TYRP14679 529 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RBMS1P29558 406 aaKnown RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF542PQ5EBM4 170 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 SPDYCQ5MJ68 293 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 OR6N1Q8NGY5 312 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 ZFP3Q96NJ6 502 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 MAGEH1Q9H213 219 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 CCSER2Q9H7U1 834 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 UTS2RQ9UKP6 389 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 MYH7P12883 1935 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 NSG1P42857 185 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 CCR3P51677 355 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 ARPC4P59998 168 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 C1orf189Q5VU69 101 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 LRRTM4Q86VH4 590 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 IRF2P14316 349 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 DCTN2Q13561 401 aaKnown RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 RBM39Q14498 530 aaKnown RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 NOMO1Q15155 1222 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms