RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CLIC1O00299 241 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 DYRK3O43781 588 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 RGS20O76081 388 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 SMPD1P17405 629 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 ENGP17813 658 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 ITPKAP23677 461 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 NOS3P29474 1203 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 PIK3CBP42338 1070 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 FAM182AQ5T1J6 154 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 MED27Q6P2C8 311 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 GALNT12Q8IXK2 581 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 CFAP52Q8N1V2 620 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 ABHD11Q8NFV4 315 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 PGAP3Q96FM1 320 aaPredicted RBP8.59□□□□□ -1.04
PCDH9-202ENST00000377865 ZFP42Q96MM3 310 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 KCNC2Q96PR1 638 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 SLC29A1Q99808 456 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 SMOQ99835 787 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 C20orf27Q9GZN8 174 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 ABCG8Q9H221 673 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 THUMPD1Q9NXG2 353 aaKnown RBP8.59□□□□□ -1.04
PCDH9-202ENST00000377865 PMF1-BGLAPU3KQ54 211 aa8.59□□□□□ -1.04
PCDH9-202ENST00000377865 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 WNT9AO14904 365 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SH3BGRLO75368 114 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 S1PR4O95977 384 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CCNYL3P0C7X3 344 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 IL4RP24394 825 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 AQP1P29972 269 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 NSG1P42857 185 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ALDH3B2P48448 385 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 IST1P53990 364 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GPR33Q49SQ1 333 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FOXB2Q5VYV0 432 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CLEC14AQ86T13 490 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 OR13J1Q8NGT2 312 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 DMRTB1Q96MA1 342 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GINS4Q9BRT9 223 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SLC32A1Q9H598 525 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 KIAA1522Q9P206 1035 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GALPQ9UBC7 116 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ABT1Q9ULW3 272 aaKnown RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 NRP1O14786 923 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 STBD1O95210 358 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 HDCP19113 662 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GPX3P22352 226 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CD52P31358 61 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 TAS2R41P59536 307 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SCARB2Q14108 478 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CLCA4Q14CN2 919 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 USP30Q70CQ3 517 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GPR65Q8IYL9 337 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 RAET1EQ8TD07 263 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GPN1Q9HCN4 374 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SNTG1Q9NSN8 517 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SMPD4Q9NXE4 827 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 A8MX80 341 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 NIPSNAP2O75323 286 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SNAPC5O75971 98 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CHIT1Q13231 466 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SYT16Q17RD7 645 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF534Q76KX8 674 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SYVN1Q86TM6 617 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 IGFN1Q86VF2 1251 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 LGI4Q8N135 537 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 NATD1Q8N6N6 113 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 TMEM125Q96AQ2 219 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 KCTD7Q96MP8 289 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 TM6SF2Q9BZW4 377 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 CMTM6Q9NX76 183 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ERVK-18Q9QC07 812 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SCML2Q9UQR0 700 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 A0A1W2PQ72 361 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FAM92AA1XBS5 289 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FAM72CH0Y354 149 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 AP3D1O14617 1153 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 DIO3P55073 304 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 C1QTNF8P60827 252 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SNAPC1Q16533 368 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GPAT3Q53EU6 434 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 RAB6CQ53S08 254 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FAM72AQ5TYM5 149 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FAM72DQ6L9T8 149 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SHQ1Q6PI26 577 aaKnown RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FAM72BQ86X60 149 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ADGRG5Q8IZF4 528 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 LINC00471Q8N535 108 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 ASCC1Q8N9N2 400 aaKnown RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 KCNJ9Q92806 393 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 EBPLQ9BY08 206 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 RAB6CQ9H0N0 254 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 GSTO2Q9H4Y5 243 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
PCDH9-202ENST00000377865 SDR39U1Q9NRG7 319 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-202ENST00000377865 FLRT1Q9NZU1 646 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms