RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SRRDQ9UH36 339 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ADAM23O75077 832 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 MPP2Q14168 576 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF461Q8TAF7 563 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 SCRN2Q96FV2 425 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 MAGEA12P43365 314 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 MOB2Q70IA6 237 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 PEG10Q86TG7 708 aaKnown RBP4.84□□□□□ -1.64
PCDH9-201ENST00000377861 SELENOMQ8WWX9 145 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 OMA1Q96E52 524 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 TRAPPC4Q9Y296 219 aa4.84□□□□□ -1.64
PCDH9-201ENST00000377861 PAGE1O75459 146 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CSTF2P33240 577 aaKnown RBP eCLIP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CD97P48960 835 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SGCGQ13326 291 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RAB12Q6IQ22 244 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ADAMTS14Q8WXS8 1223 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PHF21BQ96EK2 531 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 GRM6O15303 877 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SCNN1BP51168 640 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ARHGDIBP52566 201 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RHAGQ02094 409 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ST3GAL3Q11203 375 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM17Q86X19 198 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 P2RX7Q99572 595 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ATP5A1P25705 553 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CAMK2DQ13557 499 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM214Q6NUQ4 689 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ARHGAP36Q6ZRI8 547 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HRASLS5Q96KN8 279 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 AIG1Q9NVV5 245 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 POU6F1Q14863 301 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 KIF18BQ86Y91 864 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TWIST2Q8WVJ9 160 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZFP37Q9Y6Q3 630 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 GMFGO60234 142 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CSF3P09919 207 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MPC1LP0DKB6 136 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CXCL8P10145 99 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HPGDP15428 266 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ACVR2AP27037 513 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MYBPC1Q00872 1141 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SCRN3Q0VDG4 424 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 OTUD1Q5VV17 481 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 DPEP2Q9H4A9 486 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF221Q9UK13 617 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CDC14AQ9UNH5 594 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 IFI6P09912 130 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TAS2R40P59535 323 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 FOXRED1Q96CU9 486 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 AARSD1Q9BTE6 412 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 FNDC11Q9BVV2 318 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ABCD2Q9UBJ2 740 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ENTPD2Q9Y5L3 495 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SLC22A7Q9Y694 548 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HDCP19113 662 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PKDCCQ504Y2 493 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RTL4Q6ZR62 310 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SOWAHBA6NEL2 793 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HSPB2A8KAH6 182 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HSPB2Q16082 182 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF678Q5SXM1 525 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SPPL2AQ8TCT8 520 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF516Q92618 1163 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF570Q96NI8 536 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TNFRSF10DQ9UBN6 386 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PRSS44E7EML9 344 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ADAMTS3O15072 1205 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 FAM171BQ6P995 826 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 AKTIPQ9H8T0 292 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MRPL17Q9NRX2 175 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ACTA2P62736 377 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ACTG2P63267 376 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PITRM1Q5JRX3 1037 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ISCA2Q86U28 154 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 GPRIN2O60269 458 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 F2P00734 622 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TRBC1P01850 177 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RLN2P04090 185 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CPN2P22792 545 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 OSTNP61366 133 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 DUSP6Q16828 381 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RASSF1Q9NS23 344 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PIPP12273 146 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ALDH3B2P48448 385 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 E2F2Q14209 437 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 OTUD3Q5T2D3 398 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF782Q6ZMW2 699 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 KLHL31Q9H511 634 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SNED1Q8TER0 1413 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TLX3O43711 291 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PSMB9P28065 219 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MBTPS1Q14703 1052 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TBCEQ15813 527 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 LIMS2Q7Z4I7 341 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SLC44A3Q8N4M1 653 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 OR5P2Q8WZ92 322 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SLC47A1Q96FL8 570 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ALG13Q9NP73 1137 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms