RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ZNF846Q147U1 533 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TRMT11Q7Z4G4 463 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SERINC5Q86VE9 423 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IGFN1Q86VF2 1251 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLECL1Q8IZS7 167 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 OR4K1Q8NGD4 311 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FAR1Q8WVX9 515 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.161e-16■■■■■ 67.6
TNFRSF1B-201ENST00000376259 C2orf49Q9BVC5 232 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CEP44Q9C0F1 390 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EHD3Q9NZN3 535 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CPQQ9Y646 472 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC28A1O00337 649 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MT-ND2P03891 347 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BMP1P13497 986 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EPORP19235 508 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC11A1P49279 550 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EMX2Q04743 252 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HKDC1Q2TB90 917 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CCDC92Q53HC0 331 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RFLNAQ6ZTI6 216 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZFP90Q8TF47 636 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PROX1Q92786 737 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IL4I1Q96RQ9 567 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GPRC5BQ9NZH0 403 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SNX6Q9UNH7 406 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PCDHB14Q9Y5E9 798 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CAPN15O75808 1086 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FGF4P08620 206 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MOGQ16653 247 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF605Q86T29 641 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SPARTQ8N0X7 666 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PCSK9Q8NBP7 692 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TBC1D15Q8TC07 691 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LKAAEAR1Q8TD35 194 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SOCS4Q8WXH5 440 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TMEM159Q96B96 161 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 UROC1Q96N76 676 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PADI4Q9UM07 663 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DLGAP4Q9Y2H0 992 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PRSS21Q9Y6M0 314 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FER1L6Q2WGJ9 1857 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 A0A0G2JN53 185 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MROH6A6NGR9 719 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GSTM1P09488 218 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 OR56A5P0C7T3 313 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GABRR2P28476 465 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SERPINA4P29622 427 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TMPRSS11BQ86T26 416 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 VANGL1Q8TAA9 524 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FOXJ1Q92949 421 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 C1orf74Q96LT6 269 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DMRTB1Q96MA1 342 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ARNT2Q9HBZ2 717 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LOC285095A0A1B0GVY8 99 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ANKRD33BA6NCL7 494 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HAS3O00219 553 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TNFRSF10BO14763 440 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 AIREO43918 545 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CNOT3O75175 753 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 STATHP02808 62 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PTNP21246 168 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HTR1EP28566 365 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TUFMP49411 452 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MEF2AQ02078 507 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CYP2U1Q7Z449 544 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TMEM173Q86WV6 379 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TCF25Q9BQ70 676 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC2A11Q9BYW1 496 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PTBP2Q9UKA9 531 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZFC3H1O60293 1989 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC1A7O00341 560 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PDYNP01213 254 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FUCA1P04066 466 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CYP11A1P05108 521 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CTSKP43235 329 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RELAQ04206 551 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TRAPPC5Q8IUR0 188 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LEMD2Q8NC56 503 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MRPS31Q92665 395 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 VPS35Q96QK1 796 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 COPS4Q9BT78 406 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NDEL1Q9GZM8 345 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FAIMQ9NVQ4 179 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TRPC4Q9UBN4 977 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF225Q9UK10 706 aa14.04□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EFCAB9A8MZ26 197 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 H7C4K7 107 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SNPHO15079 494 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IGSF6O95976 241 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RPS17P08708 135 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DCTP40126 519 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ATP4BP51164 291 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CTBSQ01459 385 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CSTF3Q12996 717 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms