RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 Q8NA96 180 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 ADAMTS17Q8TE56 1095 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 COPS8Q99627 209 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 FAM129AQ9BZQ8 928 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 PHACTR1Q9C0D0 580 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 AKIRIN1Q9H9L7 192 aaPredicted RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
LSM2-208ENST00000375661 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
LSM2-208ENST00000375661 A1L4Q6 167 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 OR1I1O60431 355 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 SCRG1O75711 98 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 ZBTB11O95625 1053 aaPredicted RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 EBLN1P0CF75 366 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 ATP1B2P14415 290 aaPredicted RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 MSH3P20585 1137 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 AKT1P31749 480 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 MAGEA4P43358 317 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 CHAF1BQ13112 559 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 KCNAB1Q14722 419 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 EIF2S3LQ2VIR3 472 aaKnown RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 TMEM220Q6QAJ8 160 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 CERS6Q6ZMG9 384 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 TICAM1Q8IUC6 712 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 TMEM126BQ8IUX1 230 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 IFT20Q8IY31 132 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.79□□□□□ -0.52
LSM2-208ENST00000375661 GPR150Q8NGU9 434 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 PRR7Q8TB68 274 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 PYROXD1Q8WU10 500 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 ZFPM2Q8WW38 1151 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 MR1Q95460 341 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.79□□□□□ -0.52
LSM2-208ENST00000375661 TTC25Q96NG3 672 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 SMAD5Q99717 465 aaKnown RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 MAP3K3Q99759 626 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 ZCCHC2Q9C0B9 1178 aaKnown RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 ANKZF1Q9H8Y5 726 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 C20orf96Q9NUD7 363 aaPredicted RBP11.79□□□□□ -0.52
LSM2-208ENST00000375661 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 WDR37Q9Y2I8 494 aa11.79□□□□□ -0.52
LSM2-208ENST00000375661 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 OR5K3A6NET4 321 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 OR2AG2A6NM03 316 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 LDLRP01130 860 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 ERVK-10P10266 1014 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 OGNP20774 298 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 DCTP40126 519 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 NSG1P42857 185 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 RRADP55042 308 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 GPX6P59796 221 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 PPP1CAP62136 330 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 GPS2Q13227 327 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 CTBP1Q13363 440 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 MRPL49Q13405 166 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 CUL1Q13616 776 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 FRG1Q14331 258 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 RPE65Q16518 533 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 TYSND1Q2T9J0 566 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 HSP90AA5PQ58FG0 334 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 AARS2Q5JTZ9 985 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 TMTC4Q5T4D3 741 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 LYPLAL1Q5VWZ2 237 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 SLC6A19Q695T7 634 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 MRNIPQ6NTE8 343 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 PACS1Q6VY07 963 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 DET1Q7L5Y6 550 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 AMZ2Q86W34 360 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 KCNMB4Q86W47 210 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 CCDC25Q86WR0 208 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 DENND6AQ8IWF6 608 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 CLDN19Q8N6F1 224 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 BEND7Q8N7W2 519 aaPredicted RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 FDCSPQ8NFU4 85 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 GSDMBQ8TAX9 411 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 HEXDCQ8WVB3 486 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 ZNF501Q96CX3 271 aaPredicted RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 CERS2Q96G23 380 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 DCUN1D1Q96GG9 259 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 NLNQ9BYT8 704 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 SYTL2Q9HCH5 934 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 IARS2Q9NSE4 1012 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 MOCS1Q9NZB8 636 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
LSM2-208ENST00000375661 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 SNX7Q9UNH6 387 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 BTRCQ9Y297 605 aa11.78□□□□□ -0.52
LSM2-208ENST00000375661 KLHL33A6NCF5 533 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 CFAP99D6REC4 459 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 MEN1O00255 615 aa11.77□□□□□ -0.53
LSM2-208ENST00000375661 KLHL41O60662 606 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms