RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 H3BQ06 376 aaPredicted RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 POU2F1P14859 743 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 POMZP3Q6PJE2 187 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 SFRP1Q8N474 314 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 TRIM8Q9BZR9 551 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 XKR8Q9H6D3 395 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 PAPOLBQ9NRJ5 636 aaKnown RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 EXD2Q9NVH0 621 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 GTPBP1O00178 669 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 CD1DP15813 335 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 BPIP17213 487 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 RGRP47804 291 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 RAB8AP61006 207 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 ELAVL3Q14576 367 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 STEAP4Q687X5 459 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 ADCY4Q8NFM4 1077 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 SNRNP27Q8WVK2 155 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 ANKRD49Q8WVL7 239 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 CANT1Q8WVQ1 401 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 LRRC58Q96CX6 371 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 NSMCE3Q96MG7 304 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 YIPF4Q9BSR8 244 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 CHID1Q9BWS9 393 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 TPST2O60704 377 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 OR6A2O95222 327 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 UQCRBP14927 111 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 CCR3P51677 355 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 SRSF11Q05519 484 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 RABL3Q5HYI8 236 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 DGKKQ5KSL6 1271 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 SPANXN4Q5MJ08 99 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 GLB1L3Q8NCI6 653 aaPredicted RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 ZFRQ96KR1 1074 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 EPS8L2Q9H6S3 715 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 ADAP2Q9NPF8 381 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 MYL12BO14950 172 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 PDE9AO76083 593 aa17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 MRPL43Q8N983 215 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 RBM18Q96H35 190 aaKnown RBP17.54■□□□□ 0.4
PTPDC1-202ENST00000375360 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 FAM47E-STBD1D6RA91 191 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ERI3O43414 337 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 MAN1A2O60476 641 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 KLF8O95600 359 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 HOXD8P13378 290 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 CCNFP41002 786 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ST13P50502 369 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ACTR3P61158 418 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 RUNX3Q13761 415 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 GCNT6Q5T4J0 391 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 SVOPQ8N4V2 548 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 C6orf62Q9GZU0 229 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PAIP1Q9H074 479 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ZCCHC3Q9NUD5 404 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 TESMINQ9Y4I5 508 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ASCC3Q8N3C0 2202 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 WFS1O76024 890 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 A0A1W2PRB8 838 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 CXCR6O00574 342 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 BMP7P18075 431 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 RPL4P36578 427 aaKnown RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PCBP2Q15366 365 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 LRRC26Q2I0M4 334 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 KAT2AQ92830 837 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 MIEF2Q96C03 454 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 TUBGCP5Q96RT8 1024 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PIPSLA2A3N6 862 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 TAS2R41P59536 307 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 CYS1Q717R9 158 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PIANPQ8IYJ0 282 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 PRR11Q96HE9 360 aaPredicted RBP17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 RTP3Q9BQQ7 232 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 CNPPD1Q9BV87 410 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 MARCH5Q9NX47 278 aa17.53■□□□□ 0.4
PTPDC1-202ENST00000375360 BRWD1Q9NSI6 2320 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 IGLON5A6NGN9 336 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 SCN2BO60939 215 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 ETS2P15036 469 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 TYRP1P17643 537 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 CCR8P51685 355 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 ERVFC1P60507 584 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 PTGR1Q14914 329 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 TMIGD1Q6UXZ0 262 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 OR52B6Q8NGF0 335 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 IL17FQ96PD4 163 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 BTBD9Q96Q07 612 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 CD244Q9BZW8 370 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 MANBAO00462 879 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 PRPS1L1P21108 318 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 CPN2P22792 545 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 SMPDL3AQ92484 453 aa17.52■□□□□ 0.4
PTPDC1-202ENST00000375360 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms