RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 EGFL8Q99944 293 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 ATG10Q9H0Y0 220 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 GAREM1Q9H706 876 aa17.05■□□□□ 0.32
C9orf43-202ENST00000374165 TMEM114B3SHH9 223 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 B4DGG1 531 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 LMO7DNF2Z398 122 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 H2AFYO75367 372 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ENO2P09104 434 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SERPINB3P29508 390 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 HALP42357 657 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 RXRGP48443 463 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 FAM219BQ5XKK7 198 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 WDR75Q8IWA0 830 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 CEP76Q8TAP6 659 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SLC37A2Q8TED4 501 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 JPH3Q8WXH2 748 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 NSUN5Q96P11 429 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 NUDT4Q9NZJ9 180 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 RIF1Q5UIP0 2472 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 PPP6CO00743 305 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SMIM24O75264 130 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SLC34A2O95436 690 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 TSPAN8P19075 237 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 IMPA1P29218 277 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 HSPA7P48741 367 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ARRB1P49407 418 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 NFKB2Q00653 900 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ZNF423Q2M1K9 1284 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 DCUN1D3Q8IWE4 304 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 TBC1D21Q8IYX1 336 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 SFRP1Q8N474 314 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 C2orf73Q8N5S3 287 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 FBXO15Q8NCQ5 510 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ZDHHC1Q8WTX9 485 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ZNF480Q8WV37 535 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 LOXL4Q96JB6 756 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 TRIT1Q9H3H1 467 aaKnown RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 PNPOQ9NVS9 261 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 STOX2Q9P2F5 926 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
C9orf43-202ENST00000374165 RP1P56715 2156 aa17.04■□□□□ 0.32
C9orf43-202ENST00000374165 A0A1B0GTQ1 180 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 HSPA4LO95757 839 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ANXA5P08758 320 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 IMPDH1P20839 514 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CDH13P55290 713 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 HERVK_113P63132 956 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 FASTKQ14296 549 aaKnown RBP17.03■□□□□ 0.32
C9orf43-202ENST00000374165 PLA2G2CQ5R387 149 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ZNF678Q5SXM1 525 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CLNKQ7Z7G1 428 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CCNYL1Q8N7R7 359 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 RAD51AP1Q96B01 352 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ERVK-6Q9BXR3 956 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 DRC3Q9H069 523 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 XKR8Q9H6D3 395 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ZFP69BQ9UJL9 534 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 GMEB2Q9UKD1 530 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 DOLKQ9UPQ8 538 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 ASCC3Q8N3C0 2202 aaKnown RBP17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CHRNGP07510 517 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
C9orf43-202ENST00000374165 AP1S2P56377 157 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CDKL1Q00532 357 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 UNC50Q53HI1 259 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 KANSL1Q7Z3B3 1105 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 GKN2Q86XP6 184 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 OR9A1PQ8NGU1 263 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 EBF4Q9BQW3 602 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 INTS7Q9NVH2 962 aaKnown RBP17.03■□□□□ 0.32
C9orf43-202ENST00000374165 CPNE7Q9UBL6 633 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 RAB23Q9ULC3 237 aa17.03■□□□□ 0.32
C9orf43-202ENST00000374165 A0A1B0GTL3 188 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 E2F3O00716 465 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 ZNF292O60281 2723 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 NOBOXO60393 691 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 MAPK9P45984 424 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 MAZP56270 477 aaKnown RBP17.02■□□□□ 0.32
C9orf43-202ENST00000374165 DNAJB13P59910 316 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 KRT33BQ14525 404 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 PTCHD3Q3KNS1 767 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 SULT1C3Q6IMI6 304 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 MAVSQ7Z434 540 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 ALYREFQ86V81 257 aaKnown RBP17.02■□□□□ 0.32
C9orf43-202ENST00000374165 SLC22A9Q8IVM8 553 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 OR52E1Q8NGJ3 308 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 SAP25Q8TEE9 199 aa17.02■□□□□ 0.32
C9orf43-202ENST00000374165 CXorf40BQ96DE9 158 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms