RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RGPD8O14715 1765 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 TULP3O75386 442 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 RPIAP49247 311 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 GANABQ14697 944 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ATP13A5Q4VNC0 1218 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 PAOXQ6QHF9 649 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 SLC26A9Q7LBE3 791 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 OR6K6Q8NGW6 343 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF471Q9BX82 626 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 MAGEH1Q9H213 219 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 ACP5P13686 325 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 FMO3P31513 532 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 OR3A3P47888 321 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 OR3A2P47893 321 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 KLHL26Q53HC5 615 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 RANBP3LQ86VV4 465 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 RBM15BQ8NDT2 890 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 HEXDCQ8WVB3 486 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 LGR4Q9BXB1 951 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 BRD7Q9NPI1 651 aa14.05□□□□□ -0.16
TRAF1-201ENST00000373887 IFT80Q9P2H3 777 aaPredicted RBP14.05□□□□□ -0.16
TRAF1-201ENST00000373887 A0A0G2JN53 185 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 SAGE2PA6NJ88 616 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MAP2K7O14733 419 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 FSCN2O14926 492 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 FCER2P06734 321 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 CAND1Q86VP6 1230 aaKnown RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 STYXQ8WUJ0 223 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ASB12Q8WXK4 309 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 NUS1Q96E22 293 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MEMO1Q9Y316 297 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MATN3O15232 486 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ORC5O43913 435 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 NOL4O94818 638 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RLN2P04090 185 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 CHRNA4P43681 627 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 KCNQ1P51787 676 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RPL19P84098 196 aaKnown RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MBLAC2Q68D91 279 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RAB26Q9ULW5 256 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 GPD2P43304 727 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 S100A10P60903 97 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MAPK14Q16539 360 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 SCGB2B2Q4G0G5 96 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MED27Q6P2C8 311 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ASB18Q6ZVZ8 466 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 IQCHQ86VS3 1027 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 C12orf76Q8N812 135 aaPredicted RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 OR10A6Q8NH74 314 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RFKQ969G6 155 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RHOJQ9H4E5 214 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 GSTT2BP0CG30 244 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF20P17024 532 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ACVR2AP27037 513 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 GXYLT1Q4G148 440 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 CARD16Q5EG05 197 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF782Q6ZMW2 699 aaPredicted RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 TRABD2AQ86V40 505 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 C2orf15Q8WU43 125 aaKnown RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 TREM1Q9NP99 234 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 LOC100509620A0A075B734 347 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 MYCLP1P12525 358 aaPredicted RBP14.04□□□□□ -0.16
TRAF1-201ENST00000373887 HLA-EP13747 358 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF792Q3KQV3 632 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 DENND6BQ8NEG7 585 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 TESCQ96BS2 214 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 NODALQ96S42 347 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 SLC39A3Q9BRY0 314 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
TRAF1-201ENST00000373887 A8MUA0 341 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 SNAI1O95863 264 aaPredicted RBP14.03□□□□□ -0.16
TRAF1-201ENST00000373887 CRHR1P34998 444 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 ASMTP46597 345 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 COL9A2Q14055 689 aaPredicted RBP14.03□□□□□ -0.16
TRAF1-201ENST00000373887 FAM156AQ8NDB6 213 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 C1orf216Q8TAB5 229 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF516Q92618 1163 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 MED11Q9P086 117 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 PLLPQ9Y342 182 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 A0A0G2JPF8 293 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 HNRNPCL3B7ZW38 293 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 WFS1O76024 890 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 HNRNPCL4P0DMR1 293 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 ACTR1BP42025 376 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 CDKN2BP42772 138 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 GRK6P43250 576 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 VEGFBP49765 207 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 ACTR1AP61163 376 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 AP1S1P61966 158 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 SLC13A2Q13183 592 aa14.03□□□□□ -0.16
TRAF1-201ENST00000373887 KLF1Q13351 362 aaPredicted RBP14.03□□□□□ -0.16
TRAF1-201ENST00000373887 FASTKD3Q14CZ7 662 aaKnown RBP14.03□□□□□ -0.16
TRAF1-201ENST00000373887 ANKRD22Q5VYY1 191 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms