RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 CGREF1Q99674 301 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM79Q9BSE2 394 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 BOCQ9BWV1 1114 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 APOL5Q9BWW9 433 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF696Q9H7X3 374 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 RMI1Q9H9A7 625 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 NANOGQ9H9S0 305 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 FBRSL1Q9HCM7 1045 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 FAM120CQ9NX05 1096 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 ANAPC2Q9UJX6 822 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 IKZF3Q9UKT9 509 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SCML1Q9UN30 329 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 CCL26Q9Y258 94 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 HCFC2Q9Y5Z7 792 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 SCN8AQ9UQD0 1980 aa8.5□□□□□ -1.05
SNRNP40-202ENST00000373720 NUP210Q8TEM1 1887 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 A0A096LPI6 279 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ARHGAP10A1A4S6 786 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 IQCF5A8MTL0 148 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 EVPLLA8MZ36 301 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 LOC730098B7Z3J9 87 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 H0YAE9 185 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PPP6CO00743 305 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 DPM1O60762 260 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GUCA1CO95843 209 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ADH1BP00325 375 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ABCB1P08183 1280 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 FAM58BPP0C7Q3 252 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PABPC4LP0CB38 370 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ZCCHC18P0CG32 403 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RAP2AP10114 183 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 G6PDP11413 515 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF26P17031 533 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PSMC3P17980 439 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 TSPAN8P19075 237 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 FSHRP23945 695 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PEX2P28328 305 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GRIA2P42262 883 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GRIA3P42263 894 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PIK3CBP42338 1070 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RPL5P46777 297 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GSK3BP49841 420 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 NME5P56597 212 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 UFM1P61960 85 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 IRF8Q02556 426 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 FCHO2Q0JRZ9 810 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ABHD18Q0P651 414 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 MTAPQ13126 283 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GPM6BQ13491 265 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ABRAXAS2Q15018 415 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 KIAA0040Q15053 153 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PDK3Q15120 406 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PHKG1Q16816 387 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RFX4Q33E94 735 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RFTN2Q52LD8 501 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 USP39Q53GS9 565 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 TBCELQ5QJ74 424 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 CAPN13Q6MZZ7 669 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GALNT18Q6P9A2 607 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 BORAQ6PGQ7 559 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ADAMTSL4Q6UY14 1074 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ZBTB49Q6ZSB9 765 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 CAMKMTQ7Z624 323 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 SERPINA11Q86U17 422 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 GPR180Q86V85 440 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 SLC30A8Q8IWU4 369 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RGL4Q8IZJ4 473 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 SVOPLQ8N434 492 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 OR8J2Q8NGG1 315 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 OR6K2Q8NGY2 324 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 OR56A3Q8NH54 315 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ASB12Q8WXK4 309 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 SUSD6Q92537 303 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 NCLNQ969V3 563 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 SDCCAG3Q96C92 435 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 TCEAL4Q96EI5 215 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RNF145Q96MT1 663 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 KCNA7Q96RP8 456 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ACOX2Q99424 681 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 C1QTNF7Q9BXJ2 289 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 MRPS26Q9BYN8 205 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ANKRD60Q9BZ19 345 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 TMEM245Q9H330 911 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 RAD21L1Q9H4I0 556 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 COPS7BQ9H9Q2 264 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ZFP14Q9HCL3 533 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ZDHHC4Q9NPG8 344 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 ATAD3AQ9NVI7 634 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 DNAAF2Q9NVR5 837 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 HCFC1R1Q9NWW0 138 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 AHSPQ9NZD4 102 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 VPS29Q9UBQ0 182 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 KLQ9UEF7 1012 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 BTRCQ9Y297 605 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 PRSS21Q9Y6M0 314 aa8.49□□□□□ -1.05
SNRNP40-202ENST00000373720 LRRC14BA6NHZ5 514 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 H3BM21 787 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms