RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 SUSD6Q92537 303 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 KLHL25Q9H0H3 589 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 LINC00597Q9H2U6 94 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZDHHC3Q9NYG2 299 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PRSS51A0A1B0GVH4 220 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 STX16O14662 325 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MTHFD2P13995 350 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ST13P50502 369 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CTSL3PQ5NE16 218 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CCNYL2Q5T2Q4 361 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ACBD5Q5T8D3 534 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SMYD1Q8NB12 490 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PSMA8Q8TAA3 256 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 OR51B5Q9H339 312 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SLC32A1Q9H598 525 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 IMP3Q9NV31 184 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TMEM181Q9P2C4 612 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TLL1O43897 1013 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ARSFP54793 590 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 EMX2Q04743 252 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DRGXA6NNA5 263 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MAGEB17A8MXT2 336 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 LEFTY2O00292 366 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ACOT8O14734 319 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TYRP14679 529 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 OR1E2P47887 323 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CDH12P55289 794 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FRG2Q64ET8 278 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 C22orf39Q6P5X5 142 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 NCEH1Q6PIU2 408 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FAM124AQ86V42 546 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CNIH3Q8TBE1 160 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZNF296Q8WUU4 475 aaPredicted RBP17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FRG2BQ96QU4 278 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 RHBGQ9H310 441 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TPK1Q9H3S4 243 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MAGEB3O15480 346 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CREG1O75629 220 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 IL6P05231 212 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CDH1P12830 882 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 LAG3P18627 525 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CARD16Q5EG05 197 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 R3HCC1LQ7Z5L2 792 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SLCO6A1Q86UG4 719 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 HEATR4Q86WZ0 1026 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 C2orf15Q8WU43 125 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ISL2Q96A47 359 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 NODALQ96S42 347 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ITM2BQ9Y287 266 aa17.25■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SOD2P04179 222 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 KCNAB2Q13303 367 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TNFAIP8L2Q6P589 184 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DEF8Q6ZN54 512 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TPRG1Q6ZUI0 275 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 BEND5Q7L4P6 421 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CHPFQ8IZ52 775 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SETD9Q8NE22 299 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TMEM125Q96AQ2 219 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 VPS35Q96QK1 796 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 HEPHQ9BQS7 1158 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 AASDHPPTQ9NRN7 309 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 USE1Q9NZ43 259 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DENRO43583 198 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 IGLV3-25P01717 112 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 UMPSP11172 480 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DNAJB1P25685 340 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SEPHS1P49903 392 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CNTN1Q12860 1018 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 EXOSC8Q96B26 276 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PPCDCQ96CD2 204 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 OTUB1Q96FW1 271 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 INPP5KQ9BT40 448 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TMCO1Q9UM00 188 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MITFO75030 526 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ALOX12P18054 663 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DEFB103AP81534 67 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 EQTNQ9NQ60 294 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 NINQ8N4C6 2090 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 H3BNH8 94 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TNFRSF1BP20333 461 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 RFC2P35250 354 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 GDPD4Q6W3E5 623 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 VTCN1Q7Z7D3 282 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZNF605Q86T29 641 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MINDY1Q8N5J2 469 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FRS2Q8WU20 508 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 RBM4BQ9BQ04 359 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 RBM4Q9BWF3 364 aaKnown RBP17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MTRRQ9UBK8 725 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 RPS6KA6Q9UK32 745 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CLEC4EQ9ULY5 219 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 GPR45Q9Y5Y3 372 aa17.24■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ATG13O75143 517 aa17.23■□□□□ 0.35
TRAF3IP1-201ENST00000373327 B3GALT4O96024 378 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms