RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 HCAR2Q8TDS4 363 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 STYXQ8WUJ0 223 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SLC44A1Q8WWI5 657 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 GAB3Q8WWW8 586 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 OR8D1Q8WZ84 308 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ZNF566Q969W8 418 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SCRN2Q96FV2 425 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CERS2Q96G23 380 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CDKN2AIPNLQ96HQ2 116 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 LRIG1Q96JA1 1093 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MRGPRX1Q96LB2 322 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 LYSMD1Q96S90 227 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CYTH2Q99418 400 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PAFAH2Q99487 392 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CHCHD6Q9BRQ6 235 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ROPN1BQ9BZX4 212 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 RSPH9Q9H1X1 276 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 ROPN1Q9HAT0 212 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 BPIFA1Q9NP55 256 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 IARS2Q9NSE4 1012 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 C20orf96Q9NUD7 363 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 NLE1Q9NVX2 485 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 C2orf42Q9NWW7 574 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 IL17CQ9P0M4 197 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MARCH4Q9P2E8 410 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 SLC39A10Q9ULF5 831 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 RIMKLBQ9ULI2 386 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CA14Q9ULX7 337 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CKAP5Q14008 2032 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 BDP1A6H8Y1 2624 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 A6NLC8 198 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 GAPDHSO14556 408 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 KIF1CO43896 1103 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 RPP40O75818 363 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 IL1BP01584 269 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SLC4A1P02730 911 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 C8BP07358 591 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 C1SP09871 688 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CHRNB1P11230 501 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CREB1P16220 341 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 GM2AP17900 193 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 DRD3P35462 400 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 HMGCLP35914 325 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MSH2P43246 934 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ABCG1P45844 678 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SLC6A9P48067 706 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 KCNC1P48547 511 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PSMD8P48556 350 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 RPS14P62263 151 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 MRPS21P82921 87 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 XIAPP98170 497 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SATB1Q01826 763 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CNTN1Q12860 1018 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 RALGDSQ12967 914 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CTBP1Q13363 440 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PEX6Q13608 980 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SEMA3AQ14563 771 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ELAVL3Q14576 367 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 SKIDA1Q1XH10 827 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 KLHL38Q2WGJ6 581 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ZNF789Q5FWF6 425 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 LRRC66Q68CR7 880 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PDPK2PQ6A1A2 396 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 NEPROQ6NW34 567 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 BRAT1Q6PJG6 821 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 Q6ZS52 159 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MARK2Q7KZI7 788 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 DPPA4Q7L190 304 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PTAR1Q7Z6K3 402 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 GALNT5Q7Z7M9 940 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 TTC7BQ86TV6 843 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 LDB1Q86U70 411 aaPredicted RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 MOGAT3Q86VF5 341 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 KCNMB4Q86W47 210 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PPP1R3BQ86XI6 285 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 TDRPQ86YL5 185 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 DENND6AQ8IWF6 608 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CTAGE3PQ8IX95 158 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 GALNT15Q8N3T1 639 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 AADATQ8N5Z0 425 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 HIPK4Q8NE63 616 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ACVR1CQ8NER5 493 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ADAMTS18Q8TE60 1221 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 HDAC2Q92769 488 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 MUL1Q969V5 352 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 TLCD1Q96CP7 247 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 PGM2Q96G03 612 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CCDC77Q9BR77 488 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 GPR63Q9BZJ6 419 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 TRABDQ9H4I3 376 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 HACD3Q9P035 362 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 THEGQ9P2T0 379 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MYOTQ9UBF9 498 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ASH2LQ9UBL3 628 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 WNT16Q9UBV4 365 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SERGEFQ9UGK8 458 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 TBK1Q9UHD2 729 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 LGALS13Q9UHV8 139 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 SLC24A2Q9UI40 661 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 NDRG2Q9UN36 371 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms