RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TCF12Q99081 682 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GPR21Q99679 349 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 MRPL57Q9BQC6 102 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 PLCD4Q9BRC7 762 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GATA5Q9BWX5 397 aaPredicted RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 LGR4Q9BXB1 951 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 STRADBQ9C0K7 418 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TMEM168Q9H0V1 697 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 MRPL46Q9H2W6 279 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 ALG9Q9H6U8 611 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ASB8Q9H765 288 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 CYP4F12Q9HCS2 524 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 IL26Q9NPH9 171 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 MRPL40Q9NQ50 206 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 PNPOQ9NVS9 261 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 OXSMQ9NWU1 459 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GALPQ9UBC7 116 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 KLQ9UEF7 1012 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 PISDQ9UG56 409 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TSR3Q9UJK0 312 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 DOLKQ9UPQ8 538 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 LOXL2Q9Y4K0 774 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 RNF215Q9Y6U7 377 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 COL12A1Q99715 3063 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 LRRK1Q38SD2 2015 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 IQCF5A8MTL0 148 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 TARM1B6A8C7 271 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 ZBTB14O43829 449 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 WISP3O95389 354 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 TGDSO95455 350 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 HSPA4LO95757 839 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 PKMP14618 531 aaKnown RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 TFEBP19484 476 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 XPAP23025 273 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 HTR1BP28222 390 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SPAM1P38567 509 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 AQP5P55064 265 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 KIAA1024LP59773 190 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 C16orf72Q14CZ0 275 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 TBR1Q16650 682 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 TECRLQ5HYJ1 363 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 CTSL3PQ5NE16 218 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 LIPMQ5VYY2 423 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 BRAT1Q6PJG6 821 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 ZNF574Q6ZN55 896 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 VASH2Q86V25 355 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SERPINA9Q86WD7 417 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 NRROSQ86YC3 692 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 FITM2Q8N6M3 262 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 CCNYL1Q8N7R7 359 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 Q8N9G6 341 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 SIDT2Q8NBJ9 832 aaKnown RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 FAM46DQ8NEK8 389 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 OR56A4Q8NGH8 313 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 AGR3Q8TD06 166 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 PPP4R1Q8TF05 950 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 USP7Q93009 1102 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 TMEM159Q96B96 161 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 BIRC8Q96P09 236 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SLC30A3Q99726 388 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SHCBP1LQ9BZQ2 653 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 TRIM4Q9C037 500 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 MYLK2Q9H1R3 596 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 ABCG8Q9H221 673 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SEMA6CQ9H3T2 930 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 KCNK13Q9HB14 408 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 SARS2Q9NP81 518 aaKnown RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.73□□□□□ -0.85
TPM3-210ENST00000368530 LRIT1Q9P2V4 623 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 CD84Q9UIB8 345 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 CRLS1Q9UJA2 301 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 VPS9D1Q9Y2B5 631 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 ST14Q9Y5Y6 855 aa9.73□□□□□ -0.85
TPM3-210ENST00000368530 FLNCQ14315 2725 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 AGRPO00253 132 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 TNFRSF10CO14798 259 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 NUDT21O43809 227 aaKnown RBP9.72□□□□□ -0.85
TPM3-210ENST00000368530 VPS26AO75436 327 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 PCCBP05166 539 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 JMJD7P0C870 316 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 CD1DP15813 335 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 CHRM3P20309 590 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 NAGLUP54802 743 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
TPM3-210ENST00000368530 CYP4F2P78329 520 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 PTSQ03393 145 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.852e-7■□□□□ 8.7
TPM3-210ENST00000368530 NFATC2Q13469 925 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 ARHGEF7Q14155 803 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 NR1D2Q14995 579 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 SETDB1Q15047 1291 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 ACAP2Q15057 778 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 C14orf28Q4W4Y0 310 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 PAQR3Q6TCH7 311 aa9.72□□□□□ -0.85
TPM3-210ENST00000368530 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms