RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 PHPT1Q9NRX4 125 aaPredicted RBP11.23□□□□□ -0.61
RD3-201ENST00000367002 TMEM248Q9NWD8 314 aa11.23□□□□□ -0.61
RD3-201ENST00000367002 TVP23BQ9NYZ1 205 aa11.23□□□□□ -0.61
RD3-201ENST00000367002 OAS3Q9Y6K5 1087 aaKnown RBP11.23□□□□□ -0.61
RD3-201ENST00000367002 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
RD3-201ENST00000367002 MYH13Q9UKX3 1938 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 MPZL2O60487 215 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TGFB1P01137 390 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 C9P02748 559 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 NUDT6P53370 316 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PRKCZQ05513 592 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 HKDC1Q2TB90 917 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PIK3R6Q5UE93 754 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 KIAA1324Q6UXG2 1013 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 PRR23BQ6ZRT6 265 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 CCDC80Q76M96 950 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 GOLGA7Q7Z5G4 137 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 COMMD2Q86X83 199 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 UBE2J2Q8N2K1 259 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 SRFBP1Q8NEF9 429 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 RERGQ96A58 199 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 C11orf24Q96F05 449 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 IMP4Q96G21 291 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 IL4I1Q96RQ9 567 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 POLR2J3Q9H1A7 115 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 MRM3Q9HC36 420 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 MAGEE1Q9HCI5 957 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 ZNF221Q9UK13 617 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3DA0A087WVF3 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3IA0A087WXS9 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3EA0A087X179 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3KA0A087X1G2 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 A0A1W2PRB8 838 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3FA6NER0 549 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3LB9A6J9 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 M0QX08 132 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 STX16O14662 325 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 OR1F1O43749 312 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 CAPN15O75808 1086 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 DHFRP00374 187 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3HP0C7X1 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PROZP22891 400 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PTX3P26022 381 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 AP1S2P56377 157 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 IL18Q14116 193 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PTGR1Q14914 329 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3GQ6DHY5 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3CQ6IPX1 549 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TBC1D3Q8IZP1 549 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 C1orf52Q8N6N3 182 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 RSPH9Q9H1X1 276 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 FLRT1Q9NZU1 646 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 CLEC4AQ9UMR7 237 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 ING4Q9UNL4 249 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TRBV23OR9-2A0A075B6M9 112 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 LRRC14BA6NHZ5 514 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 CCNDBP1O95273 360 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 SNAP29O95721 258 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 EPHX1P07099 455 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 C8AP07357 584 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 IQCF3P0C7M6 154 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 GANABQ14697 944 aaKnown RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 LGI4Q8N135 537 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 OR2AP1Q8NGE2 309 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 ZNF347Q96SE7 839 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 DCSTAMPQ9H295 470 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 TOR3AQ9H497 397 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 CCM2LQ9NUG4 571 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 MARCH4Q9P2E8 410 aaPredicted RBP11.22□□□□□ -0.61
RD3-201ENST00000367002 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
RD3-201ENST00000367002 ZCWPW2A0A1B0GU75 182 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 IRGMA1A4Y4 181 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 ARSDP51689 593 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 PNLIPRP1P54315 467 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 GPR17Q13304 367 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 ZNF829Q3KNS6 432 aaPredicted RBP11.21□□□□□ -0.61
RD3-201ENST00000367002 UNC50Q53HI1 259 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 UMODL1-AS1Q8N2C9 162 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 CLIP4Q8N3C7 705 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 TSPEARQ8WU66 669 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 IPCEF1Q8WWN9 437 aaPredicted RBP11.21□□□□□ -0.61
RD3-201ENST00000367002 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 SCLYQ96I15 445 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 SNTG1Q9NSN8 517 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 RNF11Q9Y3C5 154 aa11.21□□□□□ -0.61
RD3-201ENST00000367002 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms