RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DYTNA2CJ06 578 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 IL2RAP01589 272 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CRYABP02511 175 aaKnown RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CD63P08962 238 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 COX6A1P12074 109 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 FOSL1P15407 271 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 NDUFS1P28331 727 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CHRNA4P43681 627 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 EFNA3P52797 238 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 KLC1Q07866 573 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 POU4F2Q12837 409 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 OLIG2Q13516 323 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 DPYSL3Q14195 570 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 KRT31Q15323 416 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 SYCP1Q15431 976 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 TLDC1Q6P9B6 456 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 UNC5AQ6ZN44 842 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CXXC5Q7LFL8 322 aaKnown RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 TMEM200AQ86VY9 491 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 AMIGO1Q86WK6 493 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 SIAH3Q8IW03 269 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 DMRTC2Q8IXT2 367 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 KBTBD2Q8IY47 623 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRSS58Q8IYP2 241 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CFAP206Q8IYR0 622 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 DNAAF3Q8N9W5 541 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 MLKLQ8NB16 471 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 PLPP7Q8NBV4 271 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CHDHQ8NE62 594 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPR137Q96N19 417 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 HGH1Q9BTY7 390 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CHRNA10Q9GZZ6 450 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 MRM3Q9HC36 420 aaKnown RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPAMQ9HCL2 828 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 EURLQ9NYK6 297 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 IL17CQ9P0M4 197 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 MRPS2Q9Y399 296 aaKnown RBP8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 COLEC10Q9Y6Z7 277 aa8.11□□□□□ -1.11
HMGB1P39-201ENST00000366304 A0A1B0GX78 115 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 POM121CA8CG34 1229 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 FAM227AF5H4B4 570 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 PROM1O43490 865 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 USP1O94782 785 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 TOXO94900 526 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRAMEF1O95521 474 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ALBP02768 609 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 FTLP02792 175 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ITGAMP11215 1152 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ACPPP15309 386 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 HMGCLP35914 325 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 CASP6P55212 293 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 IFI35P80217 286 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 RBPJQ06330 500 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 CACNG1Q06432 222 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 BOP1Q14137 746 aaKnown RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 KRT33BQ14525 404 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 SLC5A12Q1EHB4 618 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 BCL7AQ4VC05 210 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 LDLRAP1Q5SW96 308 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 TIGD7Q6NT04 549 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ARHGEF18Q6ZSZ5 1173 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 SHISA5Q8N114 240 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 SPATA3Q8NHX4 192 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 DTX3LQ8TDB6 740 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 THAP3Q8WTV1 239 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 CPLX3Q8WVH0 158 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 TEKT4Q8WW24 435 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 N4BP2L2Q92802 583 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 RBM41Q96IZ5 413 aaKnown RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 MAGED4Q96JG8 741 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 LINC00615Q96LM1 132 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 TRIM51Q9BSJ1 452 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 SMOXQ9NWM0 555 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 STOX2Q9P2F5 926 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 MYO1AQ9UBC5 1043 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ST6GALNAC2Q9UJ37 374 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 PLCL2Q9UPR0 1127 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 ASB1Q9Y576 335 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 MAU2Q9Y6X3 613 aa8.1□□□□□ -1.11
HMGB1P39-201ENST00000366304 GLYATL1P3A0A0U1RQE8 302 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 NPIPA5E9PKD4 350 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 FFAR3O14843 346 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 DSCR3O14972 297 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPR42O15529 346 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 PMPCBO75439 489 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 NDST3O95803 873 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 SERPINA7P05543 415 aa8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 CHRM5P08912 532 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P39-201ENST00000366304 DESP17661 470 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms