RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PLCL2Q9UPR0 1127 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 NDUFS3O75489 264 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TMEM63AO94886 807 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MATN4O95460 622 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ONECUT2O95948 504 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 S1PR4O95977 384 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KRT14P02533 472 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MLNP12872 115 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MAGP20916 626 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PTGIRP43119 386 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GPS1Q13098 491 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CCSMST1Q4G0I0 132 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 FCRL6Q6DN72 434 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MRNIPQ6NTE8 343 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ASB18Q6ZVZ8 466 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CENPUQ71F23 418 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 HOOK3Q86VS8 718 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MCUQ8NE86 351 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CFAP61Q8NHU2 1237 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DENND1AQ8TEH3 1009 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PBKQ96KB5 322 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 IL17FQ96PD4 163 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TRIM56Q9BRZ2 755 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CIDEBQ9UHD4 219 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KLK4Q9Y5K2 254 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 HECTD1Q9ULT8 2610 aa13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZSCAN9O15535 394 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CNOT3O75175 753 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ITGAXP20702 1163 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 AGXTP21549 392 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ATP5DP30049 168 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MAGEA3P43357 314 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CHAF1BQ13112 559 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TMED2Q15363 201 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OTOAQ7RTW8 1153 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CILP2Q8IUL8 1156 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PROKR1Q8TCW9 393 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MAGOHBQ96A72 148 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC22A11Q9NSA0 550 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GALPQ9UBC7 116 aa13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TNRC6AQ8NDV7 1962 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FAM237BA0A1B0GVD1 139 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 A0A1W2PPV9 198 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MAGEB16A2A368 324 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TARM1B6A8C7 271 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NIPSNAP2O75323 286 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FKBP9O95302 570 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ESR1P03372 595 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ERGP11308 486 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FMO4P31512 558 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CD97P48960 835 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 VPS41P49754 854 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 EIF3BP55884 814 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DCDP81605 110 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SSPNQ14714 243 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ANKRD20A4Q4UJ75 823 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FIGLAQ6QHK4 219 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MED25Q71SY5 747 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 C2orf73Q8N5S3 287 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF655Q8N720 491 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TMEM102Q8N9M5 508 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 COG1Q8WTW3 980 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 N4BP2L2Q92802 583 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZUFSPQ96AP4 578 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MIB2Q96AX9 1013 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 C17orf62Q9BQA9 187 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RAB11FIP5Q9BXF6 653 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC7A5P2Q9GIP4 190 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DHCR7Q9UBM7 475 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SRPK3Q9UPE1 567 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RUVBL2Q9Y230 463 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms