RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PHKG1Q16816 387 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 NKAIN2Q5VXU1 208 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 DHRS13Q6UX07 377 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 FRA10AC1Q70Z53 315 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 DCBLD1Q8N8Z6 715 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 DENND1AQ8TEH3 1009 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 SMPDL3AQ92484 453 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 RSC1A1Q92681 617 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 FBXL8Q96CD0 374 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 GPR78Q96P69 363 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 VPS11Q9H270 941 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
NSMCE1-201ENST00000361439 TLDC2A0PJX2 215 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 NPEPPSL1A6NEC2 478 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 TLCD2A6NGC4 264 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 E7ENX8 843 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 BTN3A3O00478 584 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CAPN5O15484 640 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 THRAP10827 490 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 TFEBP19484 476 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CSF2RBP32927 897 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CCT5P48643 541 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 PPM1FP49593 454 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 INHBCP55103 352 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 TAP2Q03519 686 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CFHR1Q03591 330 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 DLG1Q12959 904 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 KRT71Q3SY84 523 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CCSMST1Q4G0I0 132 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 FBXO38Q6PIJ6 1188 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 SH2D5Q6ZV89 423 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 USP53Q70EK8 1073 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 TMPRSS7Q7RTY8 843 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 PRSS42Q7Z5A4 293 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 ARHGAP22Q7Z5H3 698 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 KMT5CQ86Y97 462 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 GPSM1Q86YR5 675 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 LINC01555Q8NAE3 123 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 ZNF480Q8WV37 535 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 KCTD4Q8WVF5 259 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 NXNL1Q96CM4 212 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 PGM2Q96G03 612 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 ZIM3Q96PE6 472 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 MRPL57Q9BQC6 102 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 NUDT22Q9BRQ3 303 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 STRADBQ9C0K7 418 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 ZMYND15Q9H091 742 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 STMN4Q9H169 189 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 XKR8Q9H6D3 395 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 VIPAS39Q9H9C1 493 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 C1GALT1Q9NS00 363 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 STOX2Q9P2F5 926 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 POMT2Q9UKY4 750 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 RNF112Q9ULX5 631 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
NSMCE1-201ENST00000361439 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PRICKLE3O43900 615 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SYF2O95926 243 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 IMPA1P29218 277 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PRDX3P30048 256 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 IRF9Q00978 393 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SLC18A2Q05940 514 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 CASP8Q14790 479 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SLC5A12Q1EHB4 618 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SULT1C3Q6IMI6 304 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 IRGCQ6NXR0 463 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 METTL2BQ6P1Q9 378 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 ZNF574Q6ZN55 896 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 HDXQ7Z353 690 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 TRABD2AQ86V40 505 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SYTL1Q8IYJ3 562 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 CYP4X1Q8N118 509 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 LMNTD1Q8N9Z9 388 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PDPRQ8NCN5 879 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PTERQ96BW5 349 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 LIN37Q96GY3 246 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 ATOH8Q96SQ7 321 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PITPNM3Q9BZ71 974 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-201ENST00000361439 PCMTD2Q9NV79 361 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms