RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 FZD4Q9ULV1 537 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 CLIC1O00299 241 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 PLOD2O00469 737 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 MMP3P08254 477 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 SLC35E2BP0CK96 405 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 IL7P13232 177 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 CLCN4P51793 760 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 HMGCS1Q01581 520 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 EMX2Q04743 252 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 CHIT1Q13231 466 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 SLITRK4Q8IW52 837 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ZNF431Q8TF32 576 aaPredicted RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 HSH2DQ96JZ2 352 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 GALPQ9UBC7 116 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 OPRL1P41146 370 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 SLC10A2Q12908 348 aaPredicted RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 GRM2Q14416 872 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 GRB7Q14451 532 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 CAPN13Q6MZZ7 669 aaPredicted RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 CYTH4Q9UIA0 394 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 GRIP1Q9Y3R0 1128 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 CDRT1O95170 752 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 GMPRP36959 345 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 DSC3Q14574 896 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CLCA4Q14CN2 919 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 ABHD11Q8NFV4 315 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 OR10Q1Q8NGQ4 319 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 OSBPL2Q9H1P3 480 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RIMS3Q9UJD0 308 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 FAM25EA8MYX2 175 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 C9IYK1 514 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 MID1O15344 667 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CLCNKBP51801 687 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 ART5Q96L15 291 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CEP295NLQ96MC4 621 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CSTF2P33240 577 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMC5-201ENST00000361138 XKP51811 444 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 LAPTM4AQ15012 233 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 OR4F6Q8NGB9 312 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 TMEM246Q9BRR3 403 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CHIAQ9BZP6 476 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 PIGUQ9H490 435 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 AASSQ9UDR5 926 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 MYBPHLA2RUH7 354 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CDC7O00311 574 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 INCA1Q0VD86 236 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 CEP97Q8IW35 865 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 SLC7A5P1Q8MH63 180 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 KLHL6Q8WZ60 621 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMC5-201ENST00000361138 ATG10Q9H0Y0 220 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 C14orf119Q9NWQ9 140 aa13.66□□□□□ -0.22
SMC5-201ENST00000361138 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
SMC5-201ENST00000361138 TTC24A2A3L6 582 aaPredicted RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 DLGAP1O14490 977 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 C22orf31O95567 290 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMC5-201ENST00000361138 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 BARD1Q99728 777 aaKnown RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 ACBD6Q9BR61 282 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SCN11AQ9UI33 1791 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ADM5C9JUS6 153 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 DIRAS1O95057 198 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 OR6A2O95222 327 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 IFNGP01579 166 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 S100A6P06703 90 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 HSD17B1P14061 328 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ACSL1P33121 698 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 DIO3P55073 304 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 FCGRTP55899 365 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 HEPACAMQ14CZ8 416 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 ADNP2Q6IQ32 1131 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SYVN1Q86TM6 617 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PJA1Q8NG27 643 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MAPK15Q8TD08 544 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 KIAA1191Q96A73 305 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 RAD51AP1Q96B01 352 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms