RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 STYXQ8WUJ0 223 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BTN2A3PQ96KV6 586 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 RAD9AQ99638 391 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 C8GP07360 202 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 RARRES1P49788 294 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CRISP3P54108 245 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CLEC6AQ6EIG7 209 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF225Q9UK10 706 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NOBOXO60393 691 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PHF13Q86YI8 300 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF726A6NNF4 738 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PAPSS1O43252 624 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PLGP00747 810 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 AVPR1BP47901 424 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 RPIAP49247 311 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 GPR158Q5T848 1215 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 VSTM1Q6UX27 236 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 KCTD9Q7L273 389 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SLC22A16Q86VW1 577 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NUSAP1Q9BXS6 441 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FAM149AA5PLN7 773 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 OR12D2P58182 307 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BCL2A1Q16548 175 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BTBD16Q32M84 506 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NCEH1Q6PIU2 408 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ATAD1Q8NBU5 361 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FUCA2Q9BTY2 467 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 RNF121Q9H920 327 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NRCAMQ92823 1304 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 CAPN14A8MX76 684 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BUD23O43709 281 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 AHCYP23526 432 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ACBD4Q8NC06 268 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 OR5T2Q8NGG2 359 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TBC1D15Q8TC07 691 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SLC13A3Q8WWT9 602 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 VSTM5A8MXK1 200 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 GPAT4Q86UL3 456 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZC3HC1Q86WB0 502 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SENP8Q96LD8 212 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NPHS1O60500 1241 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SH3D19Q5HYK7 790 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ANKRD46Q86W74 232 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FAM83DQ9H4H8 585 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 AGO3Q9H9G7 860 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BAZ2AQ9UIF9 1905 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TVP23AA6NH52 213 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 MRPS5P82675 430 aaKnown RBP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NFKB2Q00653 900 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SEMA3AQ14563 771 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PTGR1Q14914 329 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 POM121L1PQ3SYA9 428 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 IQCHQ86VS3 1027 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 ELMOD2Q8IZ81 293 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 UCK2Q9BZX2 261 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 MIR1-1HGQ9H1L0 117 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PORCNQ9H237 461 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 IGSF9Q9P2J2 1179 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FAM234BA2RU67 622 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 H3BUI4 141 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 FMO3P31513 532 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 SEC23BQ15437 767 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 HECTD2Q5U5R9 776 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 BEND4Q6ZU67 534 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 OTOP1Q7RTM1 612 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 NATD1Q8N6N6 113 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS13A-203ENST00000360280 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 PCDHGA8Q9Y5G5 932 aa9.12□□□□□ -0.95
VPS13A-203ENST00000360280 AGAP5A6NIR3 686 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PIRTP0C851 137 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CYP3A5P20815 502 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CLCQ05315 142 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GANABQ14697 944 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 FAM129CQ86XR2 697 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 COQ10BQ9H8M1 238 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 VIPP01282 170 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SNX29P2Q8IUI4 249 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PTBP2Q9UKA9 531 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 B3GALT2O43825 422 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GJB6O95452 261 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SEC23AQ15436 765 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 METTL25Q8N6Q8 603 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM145Q8NBT3 493 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 IPPKQ9H8X2 491 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PARPBPQ9NWS1 579 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GRM6O15303 877 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GABBR2O75899 941 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SLITRK3O94933 977 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms