RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 NXF2Q9GZY0 626 aaKnown RBP23.16■■□□□ 1.3
NPAS3-203ENST00000357798 FBXO44Q9H4M3 255 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 LRTM1Q9HBL6 345 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 ABCG2Q9UNQ0 655 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 DHRS7Q9Y394 339 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 TRPV2Q9Y5S1 764 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 FFAR2O15552 330 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 HOXA9P31269 272 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 PTGER3P43115 390 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 ZNF45Q02386 682 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 KIAA1614Q5VZ46 1190 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 TRIM46Q7Z4K8 759 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 ELMOD1Q8N336 334 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 SUSD3Q96L08 255 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 IL1RAPQ9NPH3 570 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 CHD5Q8TDI0 1954 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 ILVBLA1L0T0 632 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 AIREO43918 545 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 CCNDBP1O95273 360 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 GLUD1P00367 558 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 POMCP01189 267 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 KRR1Q13601 381 aaKnown RBP23.15■■□□□ 1.3
NPAS3-203ENST00000357798 ZRANB3Q5FWF4 1079 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 C6orf183Q5T699 404 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 SUSD1Q6UWL2 747 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 ZBED2Q9BTP6 218 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 TNKS2Q9H2K2 1166 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 ZFP14Q9HCL3 533 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 HOXB9P17482 250 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-203ENST00000357798 BMPR1AP36894 532 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 SEPHS1P49903 392 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 LAPTM4AQ15012 233 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 USP43Q70EL4 1123 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 OR10Q1Q8NGQ4 319 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 CAPSLQ8WWF8 208 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 CLSTN3Q9BQT9 956 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 NACA2Q9H009 215 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 ZBTB20Q9HC78 741 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-203ENST00000357798 SERHLQ9NQF3 203 aa23.15■■□□□ 1.3
NPAS3-203ENST00000357798 FKBP9O95302 570 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 SPNP16150 400 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 HMGCS1Q01581 520 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 PRKCDQ05655 676 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 USP39Q53GS9 565 aaKnown RBP23.14■■□□□ 1.3
NPAS3-203ENST00000357798 AHSA2Q719I0 299 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 KATNAL1Q9BW62 490 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 NOX1Q9Y5S8 564 aa23.14■■□□□ 1.3
NPAS3-203ENST00000357798 WBP4O75554 376 aaKnown RBP23.14■■□□□ 1.29
NPAS3-203ENST00000357798 HSPA7P48741 367 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 CARTPTQ16568 116 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 PRAMEF19Q5SWL8 479 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 AMER2Q8N7J2 671 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 PSKH2Q96QS6 385 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 P2RY12Q9H244 342 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 MICAL3Q7RTP6 2002 aa23.14■■□□□ 1.29
NPAS3-203ENST00000357798 MYO1GB0I1T2 1018 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 PRLP01236 227 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 OR4Q2P0C623 313 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 MYCLP1P12525 358 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 HOXD9P28356 352 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 LIPAP38571 399 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 SLC39A12Q504Y0 691 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 SDHAF4Q5VUM1 108 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 DESI1Q6ICB0 168 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 STK40Q8N2I9 435 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 CINPQ9BW66 212 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 ZNF408Q9H9D4 720 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 KRT84Q9NSB2 600 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 ABI2Q9NYB9 513 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 PDP1Q9P0J1 537 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 PDHXO00330 501 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 FFAR3O14843 346 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 INSIG1O15503 277 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 GPR42O15529 346 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 TAPBPO15533 448 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 ZNF682O95780 498 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 CTSKP43235 329 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 NR4A2P43354 598 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 CPT1AP50416 773 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 TPRG1LQ5T0D9 272 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 NANOGNBQ7Z5D8 188 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 FAM83FQ8NEG4 500 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 NSUN3Q9H649 340 aaKnown RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 FARSBQ9NSD9 589 aaKnown RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 CCDC59Q9P031 241 aaKnown RBP23.13■■□□□ 1.29
NPAS3-203ENST00000357798 TRPS1Q9UHF7 1281 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 RNF6Q9Y252 685 aa23.13■■□□□ 1.29
NPAS3-203ENST00000357798 E9PQ18 207 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 ULK1O75385 1050 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 RGRP47804 291 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 TUSC3Q13454 348 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 TTLL9Q3SXZ7 439 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 CCDC71Q8IV32 467 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-203ENST00000357798 C6orf62Q9GZU0 229 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-203ENST00000357798 TP63Q9H3D4 680 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-203ENST00000357798 NEK6Q9HC98 313 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 ELOVL2Q9NXB9 296 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 KIF17Q9P2E2 1029 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 CPA4Q9UI42 421 aa23.12■■□□□ 1.29
NPAS3-203ENST00000357798 ANGPTL3Q9Y5C1 460 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms