RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 BTBD1Q9H0C5 482 aa5.44□□□□□ -1.54
PTPRD-202ENST00000356435 CNOT6Q9ULM6 557 aaKnown RBP5.44□□□□□ -1.54
PTPRD-202ENST00000356435 IQCF5A8MTL0 148 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 RLN2P04090 185 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MPIP34949 423 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PIK3CBP42338 1070 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 JAM2P57087 298 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 SP140Q13342 867 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MTX3Q5HYI7 312 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LRIF1Q5T3J3 769 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LRRC69Q6ZNQ3 347 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TAS1R3Q7RTX0 852 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 OR5B17Q8NGF7 314 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GRHL3Q8TE85 626 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LENG1Q96BZ8 264 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 HNRNPABQ99729 332 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 KXD1Q9BQD3 176 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 EBPLQ9BY08 206 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GOLGA2P5Q9HBQ8 144 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TAS2R7Q9NYW3 318 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF282Q9UDV7 671 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TIAM2Q8IVF5 1701 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 FAM221BA6H8Z2 402 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TP53I11O14683 189 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MUSKO15146 869 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TREHO43280 583 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 IL7RP16871 459 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 S100A1P23297 94 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CSKP41240 450 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 OR3A3P47888 321 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 OR3A2P47893 321 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 APLP1P51693 650 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CDH12P55289 794 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 EIF5AP63241 154 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ECT2LQ008S8 904 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 NRG1Q02297 640 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 UBAP2Q5T6F2 1119 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ZYG11AQ6WRX3 759 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ADGRD2Q7Z7M1 963 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CPNE9Q8IYJ1 553 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 DNAJB8Q8NHS0 232 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LNX1Q8TBB1 728 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 UFD1Q92890 307 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TCEAL3Q969E4 200 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 SP140LQ9H930 580 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ITM2CQ9NQX7 267 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LRP6O75581 1613 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MATN3O15232 486 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 NOS1APO75052 506 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 HEXBP07686 556 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 RBMS1P29558 406 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CASP5P51878 434 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LSM3P62310 102 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ALG10Q5BKT4 473 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ABHD15Q6UXT9 468 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GPAT4Q86UL3 456 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 FUBP3Q96I24 572 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PADI2Q9Y2J8 665 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHGA11Q9Y5H2 935 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 RICTORQ6R327 1708 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ELOVL7A1L3X0 281 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PI15O43692 258 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PVALBP20472 110 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PLA2G16P53816 162 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TXNL4AP83876 142 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 OCLNQ16625 522 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 AKAP14Q86UN6 197 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 LMX1AQ8TE12 382 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 RGMAQ96B86 450 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 SPATA6Q9NWH7 488 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 IFT52Q9Y366 437 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 H3BNX3 289 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GOT2P00505 430 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CCL5P13501 91 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MAP3K8P41279 467 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 FASTKD3Q14CZ7 662 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ELOCQ15369 112 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 METTL21CQ5VZV1 264 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 BORAQ6PGQ7 559 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ABHD5Q8WTS1 349 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CCDC107Q8WV48 283 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 IRF7Q92985 503 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 DIRAS2Q96HU8 199 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 CNDP2Q96KP4 475 aaKnown RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 MED28Q9H204 178 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TTYH1Q9H313 450 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ACTL8Q9H568 366 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 SQORQ9Y6N5 450 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 A0A0G2JLL6 359 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-202ENST00000356435 TEX13CA0A0J9YWL9 993 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GABRDO14764 452 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 AP2A1O95782 977 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 ACP5P13686 325 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PTGIRP43119 386 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 GALK1P51570 392 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 PRKCDQ05655 676 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 NOMO1Q15155 1222 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 KLHL22Q53GT1 634 aa5.43□□□□□ -1.54
PTPRD-202ENST00000356435 RAB11FIP2Q7L804 512 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms