RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DUSP6Q16828 381 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 SAXO2Q658L1 398 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 JADE1Q6IE81 842 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ANKRD54Q6NXT1 300 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 HTR3DQ70Z44 454 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 DPP9Q86TI2 863 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 PHYKPLQ8IUZ5 450 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 SULF1Q8IWU6 871 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ENKURQ8TC29 256 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ISG20Q96AZ6 181 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 CCDC126Q96EE4 140 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 FAM129BQ96TA1 746 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 SMPD4Q9NXE4 827 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 LIPT1Q9Y234 373 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 KLK4Q9Y5K2 254 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 MROH6A6NGR9 719 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 UBFD1O14562 309 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 SEC22BO75396 215 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 IPO13O94829 963 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 SLC2A4P14672 509 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 GGT1P19440 569 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 CDH8P55286 799 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 MYL6P60660 151 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ERVK-8P63133 956 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 TOR1AIP1Q5JTV8 583 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 SLC26A9Q7LBE3 791 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 RNF130Q86XS8 419 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ADHFE1Q8IWW8 467 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 NPAS1Q99742 590 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 ADPGKQ9BRR6 497 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 CFHR5Q9BXR6 569 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 GLIS2Q9BZE0 524 aaPredicted RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 TMEM245Q9H330 911 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 CYP4F12Q9HCS2 524 aa15.39■□□□□ 0.05
RTN3-205ENST00000356000 EVLQ9UI08 416 aaPredicted RBP15.39■□□□□ 0.05
RTN3-205ENST00000356000 GREB1LQ9C091 1923 aaPredicted RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 C2CD4BA6NLJ0 364 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 A8MT66 165 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 PLA2G10O15496 165 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 SSX5O60225 188 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 VPS26AO75436 327 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 PFKLP17858 780 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 KCNA5P22460 613 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 NUP62P37198 522 aaPredicted RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 RAB10P61026 200 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 UBXN2AP68543 259 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 EXOSC2Q13868 293 aaKnown RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 ZNF460Q14592 562 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 LARS2Q15031 903 aaKnown RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 ENPP6Q6UWR7 440 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 ARHGAP36Q6ZRI8 547 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 HIPK1Q86Z02 1210 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 OR52K1Q8NGK4 314 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 RXFP2Q8WXD0 754 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 TUBGCP3Q96CW5 907 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 BRD7Q9NPI1 651 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 RDH8Q9NYR8 311 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 SLAMF8Q9P0V8 285 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 PCOLCE2Q9UKZ9 415 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 G3V3G9 751 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 SNAPINO95295 136 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 CDK1P06493 297 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 CSF3P09919 207 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 IGFBP5P24593 272 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 PSMB4P28070 264 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 EPHA5P54756 1037 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 SP140Q13342 867 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 GRB7Q14451 532 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 GPRIN3Q6ZVF9 776 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 UTP15Q8TED0 518 aaKnown RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 ZNF431Q8TF32 576 aaPredicted RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 PCNPQ8WW12 178 aaKnown RBP15.38■□□□□ 0.05
RTN3-205ENST00000356000 SLC9A7Q96T83 725 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 PIP5K1AQ99755 562 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 GSTO2Q9H4Y5 243 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 NSMCE4AQ9NXX6 385 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 GIMAP2Q9UG22 337 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 UBQLN2Q9UHD9 624 aa15.38■□□□□ 0.05
RTN3-205ENST00000356000 A0A0A6YYJ9 748 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 TRAV20A0A0B4J274 112 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 SYN3O14994 580 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 NUPL2O15504 423 aaKnown RBP15.37■□□□□ 0.05
RTN3-205ENST00000356000 PROM1O43490 865 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 RAD17O75943 681 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 C1RP00736 705 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 PSAPP07602 524 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 PDGFRAP16234 1089 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 HSD17B2P37059 387 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 AKR1D1P51857 326 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 KPNA2P52292 529 aaKnown RBP15.37■□□□□ 0.05
RTN3-205ENST00000356000 ARHGDIBP52566 201 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 ELP6Q0PNE2 266 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 RCAN2Q14206 197 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 RPS6KA2Q15349 733 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 CDO1Q16878 200 aa15.37■□□□□ 0.05
RTN3-205ENST00000356000 PROX2Q3B8N5 592 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms