RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CDH19Q9H159 772 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 MTG2Q9H4K7 406 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 ATP13A3Q9H7F0 1226 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 POPDC3Q9HBV1 291 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 MAGEE1Q9HCI5 957 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 C20orf96Q9NUD7 363 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-201ENST00000355766 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS13A-201ENST00000355766 LHX3Q9UBR4 397 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 SUN2Q9UH99 717 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 TBK1Q9UHD2 729 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 DCDC2Q9UHG0 476 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 SLC25A13Q9UJS0 675 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 ENTPD2Q9Y5L3 495 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 U3KQA8 63 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 USP9YO00507 2555 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-201ENST00000355766 KNTC1P50748 2209 aa6.85□□□□□ -1.31
VPS13A-201ENST00000355766 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 TSPAN11A1L157 253 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CXorf49A8MYA2 514 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 COPEO14579 308 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 LDB2O43679 373 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 H2AFYO75367 372 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 RFPL1O75677 317 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PGLSO95336 258 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ALDOAP04075 364 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CRABP2P29373 138 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SERPINA4P29622 427 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 HMGCLP35914 325 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NUDT1P36639 197 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NNMTP40261 264 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ETV4P43268 484 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CCR10P46092 362 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 LEPRP48357 1165 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 KCNC1P48547 511 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PSMD8P48556 350 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SUOXP51687 545 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PRKAA2P54646 552 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 INHBCP55103 352 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 MAXP61244 160 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ST8SIA6P61647 398 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 RAD51Q06609 339 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 POU6F1Q14863 301 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ZKSCAN8Q15776 578 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SEPT7Q16181 437 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 KCTD19Q17RG1 926 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 TYSND1Q2T9J0 566 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CCDC153Q494R4 210 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 FSCBQ5H9T9 825 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ARMC12Q5T9G4 340 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NEPROQ6NW34 567 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 C22orf39Q6P5X5 142 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SRLQ86TD4 932 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ZC3HC1Q86WB0 502 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 MMAAQ8IVH4 418 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 KIRREL3Q8IZU9 778 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ARL14Q8N4G2 192 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 FAM26EQ8N5C1 309 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 AADATQ8N5Z0 425 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NETO2Q8NC67 525 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 OR2AP1Q8NGE2 309 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 OR13J1Q8NGT2 312 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 OR14C36Q8NHC7 312 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 RDH11Q8TC12 318 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 IFI44Q8TCB0 444 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 WFDC5Q8TCV5 224 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 DYDC1Q8WWB3 177 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CKAP2Q8WWK9 683 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ECHDC3Q96DC8 303 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 MFSD3Q96ES6 412 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 VPS39Q96JC1 886 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 APOLD1Q96LR9 279 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SIKE1Q9BRV8 207 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 ABCG4Q9H172 646 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PPANQ9NQ55 473 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 CHRAC1Q9NRG0 131 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 INTS10Q9NVR2 710 aaKnown RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NLE1Q9NVX2 485 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NLGN3Q9NZ94 848 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 NFKBIL1Q9UBC1 381 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-201ENST00000355766 GRID1Q9ULK0 1009 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 DMTF1Q9Y222 760 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PPIL1Q9Y3C6 166 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 COMMD10Q9Y6G5 202 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 KNL1Q8NG31 2342 aa6.84□□□□□ -1.31
VPS13A-201ENST00000355766 COL27A1Q8IZC6 1860 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 BLACEA4D250 179 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 RGSL1A5PLK6 1076 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 ANKRD66B4E2M5 251 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 TRAFD1O14545 582 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 NDUFAB1O14561 156 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PRICKLE3O43900 615 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 SNAP91O60641 907 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PIAS2O75928 621 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 TNFSF15O95150 251 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms