RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 GTF2BQ00403 316 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 FRRS1Q6ZNA5 592 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 C17orf64Q86WR6 236 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 RALGPS2Q86X27 583 aaPredicted RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 DENND1CQ8IV53 801 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 STYXQ8WUJ0 223 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SLIT2O94813 1529 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 NT5C1B-RDH14C9J2C7 533 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 KDM4BO94953 1096 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SLC35G6P0C7Q6 338 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 CAV3P56539 151 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ADIGQ0VDE8 80 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 DBPQ10586 325 aaPredicted RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 COLEC10Q9Y6Z7 277 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 MN1Q10571 1320 aaPredicted RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 CAPN14A8MX76 684 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 XKP51811 444 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 NDST2P52849 883 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ERMP1Q7Z2K6 904 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SENP2Q9HC62 589 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 EXOSC1Q9Y3B2 195 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 A0A1W2PP18 115 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 PTPRRQ15256 657 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 Q3C1V9 767 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 MPP7Q5T2T1 576 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 MMAAQ8IVH4 418 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 SLC15A3Q8IY34 581 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 GHDCQ8N2G8 530 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 KIF25Q9UIL4 384 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 VWA7Q9Y334 891 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 IRS2Q9Y4H2 1338 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ADAM12O43184 909 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 LAMP2P13473 410 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 PTBP1P26599 531 aaKnown RBP eCLIP7.88□□□□□ -1.154e-7■■□□□ 13.9
HTT-201ENST00000355072 EFCAB12Q6NXP0 572 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 C1orf186Q6ZWK4 172 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 CARNMT1Q8N4J0 409 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 BRSK1Q8TDC3 778 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SMAP2Q8WU79 429 aaPredicted RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 ZNF354BQ96LW1 612 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ZNFX1Q9P2E3 1918 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 ZSCAN5BA6NJL1 495 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 H7C1Q1 480 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 TPT1P13693 172 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 TBX4P57082 545 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 FAAP100Q0VG06 881 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 MPPE1Q53F39 396 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 GLYATQ6IB77 296 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 PNPLA2Q96AD5 504 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SPIN1Q9Y657 262 aaPredicted RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 BTBD17A6NE02 478 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ACKR2O00590 384 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ZNF208O43345 1280 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 HCRTR2O43614 444 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 GNALP38405 381 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 RPP30P78346 268 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 BLOC1S1P78537 153 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 ARHGAP11AQ6P4F7 1023 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 IDO2Q6ZQW0 420 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 CAND1Q86VP6 1230 aaKnown RBP7.88□□□□□ -1.15
HTT-201ENST00000355072 ZNF614Q8N883 585 aa7.88□□□□□ -1.15
HTT-201ENST00000355072 SLC2A5P22732 501 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MMP8P22894 467 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 KELP23276 732 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MIPP30301 263 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 RSU1Q15404 277 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SLC9B1Q4ZJI4 515 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 COLEC12Q5KU26 742 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MTMR9Q96QG7 549 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TMEM27Q9HBJ8 222 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 A0A087WWV3 80 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 POLRMTO00411 1230 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 CLDN4O14493 209 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 UBFD1O14562 309 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 AURKAO14965 403 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SLC12A3P55017 1021 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
HTT-201ENST00000355072 ZSWIM9Q86XI8 627 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 OR7G2Q8NG99 324 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 COPS5Q92905 334 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TMEM80Q96HE8 168 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ZNF599Q96NL3 588 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CYB5R1Q9UHQ9 305 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 FAM205CA6NFA0 338 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TUBAL3A6NHL2 446 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TIPRLO75663 272 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 PBX1P40424 430 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CDKN2CP42773 168 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CLCN4P51793 760 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 PROSER3Q2NL68 480 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 XKR6Q5GH73 641 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SEZ6LQ9BYH1 1024 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TPK1Q9H3S4 243 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SLAMF7Q9NQ25 335 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 OGDHLQ9ULD0 1010 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 PCDHGA2Q9Y5H1 932 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CDKL1Q00532 357 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ZNF467Q7Z7K2 595 aaPredicted RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 ECHDC2Q86YB7 292 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 RIPOR3Q96MK2 946 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms