RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 EID3Q8N140 333 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 SLC43A3Q8NBI5 491 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 CHDHQ8NE62 594 aaPredicted RBP19.08■□□□□ 0.65
COL13A1-201ENST00000354547 ACDQ96AP0 544 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 APIPQ96GX9 242 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 BARD1Q99728 777 aaKnown RBP19.08■□□□□ 0.65
COL13A1-201ENST00000354547 VPS4AQ9UN37 437 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 MYOFQ9NZM1 2061 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 ABCB7O75027 752 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 CCDC115Q96NT0 180 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 SH3GL1Q99961 368 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 MYOCQ99972 504 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 HTATIP2Q9BUP3 242 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 NTMT1Q9BV86 223 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 CFAP97Q9P2B7 532 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 SLC22A14Q9Y267 594 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 SCN5AQ14524 2016 aa19.08■□□□□ 0.64
COL13A1-201ENST00000354547 ABLIM3O94929 683 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 FTH1P02794 183 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 DCTP40126 519 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 PTCHD3Q3KNS1 767 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 AADATQ8N5Z0 425 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 GLB1L3Q8NCI6 653 aaPredicted RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 CSF3RQ99062 836 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 COPS8Q99627 209 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 YTHDF1Q9BYJ9 559 aaKnown RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 ZDHHC6Q9H6R6 413 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 HMX1Q9NP08 348 aaPredicted RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 DCAF13Q9NV06 445 aaKnown RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 TMEM45AQ9NWC5 275 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 CDH7Q9ULB5 785 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 LOC100130705A0A1B0GUX0 176 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 PER2O15055 1255 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 SCELO95171 688 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 FSHRP23945 695 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 SERPINA4P29622 427 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 PLA2G16P53816 162 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 PPP2R2BQ00005 443 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 B4GALNT1Q00973 533 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 IL5RAQ01344 420 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 CDKN3Q16667 212 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 GRAMD4Q6IC98 578 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF783Q6ZMS7 281 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 MACC1Q6ZN28 852 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 NRBF2Q96F24 287 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 RBM4BQ9BQ04 359 aaKnown RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 RBM4Q9BWF3 364 aaKnown RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 DNAAF2Q9NVR5 837 aaKnown RBP19.07■□□□□ 0.64
COL13A1-201ENST00000354547 VNN3Q9NY84 501 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 LMCD1Q9NZU5 365 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 TRPS1Q9UHF7 1281 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 PPT2Q9UMR5 302 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 BACE2Q9Y5Z0 518 aa19.07■□□□□ 0.64
COL13A1-201ENST00000354547 SH3PXD2BA1X283 911 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 IGSF6O95976 241 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 BCL10O95999 233 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 GABRR2P28476 465 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 HALP42357 657 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 C21orf59P57076 290 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 SERPINA13PQ6UXR4 307 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 ADHFE1Q8IWW8 467 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 CMTM8Q8IZV2 173 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 DOK1Q99704 481 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 SLC32A1Q9H598 525 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 hCG_2039718K7EN88 272 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 RFXANKO14593 260 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF821O75541 412 aaPredicted RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 HTR1AP08908 422 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 NSG1P42857 185 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 BMXP51813 675 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 ATP1A4Q13733 1029 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 ZCCHC8Q6NZY4 707 aaKnown RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 CRIPAKQ8N1N5 446 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 USP7Q93009 1102 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 RIBC2Q9H4K1 309 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 SERHLQ9NQF3 203 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 TBC1D23Q9NUY8 699 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 KCTD5Q9NXV2 234 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 INTS6Q9UL03 887 aaKnown RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 TRBV5-4A0A0C4DH59 114 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 PABPN1LA6NDY0 278 aaKnown RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 GREM1O60565 184 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 CPNE6O95741 557 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 UGT2B4P06133 528 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 EPHB3P54753 998 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 CROCCP3Q8IVE0 287 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 TMEM132CQ8N3T6 1108 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 BEND7Q8N7W2 519 aaPredicted RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 TMEM169Q96HH4 297 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 ABCB8Q9NUT2 735 aa19.06■□□□□ 0.64
COL13A1-201ENST00000354547 DNMT3BQ9UBC3 853 aaKnown RBP19.06■□□□□ 0.64
COL13A1-201ENST00000354547 INMTO95050 263 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 CPSF4O95639 269 aaKnown RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 HIST1H2AGP0C0S8 130 aaPredicted RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 SDC1P18827 310 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 HIST1H2ADP20671 130 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 LSM3P62310 102 aaKnown RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF648Q5T619 568 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms