RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CCDC70Q6NSX1 233 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 GFRALQ6UXV0 394 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 CDHR3Q6ZTQ4 885 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 NT5DC3Q86UY8 548 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 HOOK3Q86VS8 718 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 TMEM151BQ8IW70 566 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 OR2Y1Q8NGV0 311 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 TEKT4Q8WW24 435 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 LCN9Q8WX39 176 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 RELTQ969Z4 430 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 PTERQ96BW5 349 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 CCDC120Q96HB5 630 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 BTBD6Q96KE9 485 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 SRMSQ9H3Y6 488 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 SLC6A20Q9NP91 592 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 TXLNGQ9NUQ3 528 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 COLEC10Q9Y6Z7 277 aa10.82□□□□□ -0.68
RTN3-204ENST00000354497 HIVEP1P15822 2718 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 CCDC162PA2VCL2 907 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 MATN2O00339 956 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A9O60656 530 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 SMIM24O75264 130 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 SKAP2O75563 359 aaPredicted RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 OR2B3O76000 313 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 WFS1O76024 890 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 CD63P08962 238 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A6P19224 532 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A1P22309 533 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A4P22310 534 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 NDUFS1P28331 727 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 PRDX3P30048 256 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 SSTR2P30874 369 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 STIP1P31948 543 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 MRPS25P82663 173 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 ZBTB17Q13105 803 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 TBX2Q13207 712 aaPredicted RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 PAFAH1B3Q15102 231 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 GLE1Q53GS7 698 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 PRAMEF13Q5VWM6 474 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 FCRL6Q6DN72 434 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 FAM151BQ6UXP7 276 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 ZNF808Q8N4W9 903 aaPredicted RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 CATSPER1Q8NEC5 780 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 OR1N1Q8NGS0 311 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 ZNF473Q8WTR7 871 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 NAT14Q8WUY8 206 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 MAIP1Q8WWC4 291 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 TSGA13Q96PP4 275 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 SPRTNQ9H040 489 aaPredicted RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 VCX3BQ9H321 246 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A7Q9HAW7 530 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A10Q9HAW8 530 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 UGT1A8Q9HAW9 530 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 VCX3AQ9NNX9 186 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 DHCR7Q9UBM7 475 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 PAIP2BQ9ULR5 123 aaKnown RBP10.81□□□□□ -0.68
RTN3-204ENST00000354497 SPO11Q9Y5K1 396 aa10.81□□□□□ -0.68
RTN3-204ENST00000354497 PIKFYVEQ9Y2I7 2098 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 BTN3A1O00481 513 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 CNOT3O75175 753 aaKnown RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 UMODP07911 640 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 MSH3P20585 1137 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 MX2P20592 715 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 SPAM1P38567 509 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 SOX8P57073 446 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 KRTAP10-9P60411 292 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 ELF3P78545 371 aaPredicted RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 SLC25A11Q02978 314 aaKnown RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 GBE1Q04446 702 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 DPYSL3Q14195 570 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 ASIC2Q16515 512 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 LDLRAP1Q5SW96 308 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 MFSD4BQ5TF39 518 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 CDKAL1Q5VV42 579 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 METRNLQ641Q3 311 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 IRF2BP2Q7Z5L9 587 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 VSTM4Q8IW00 320 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 ARFGAP2Q8N6H7 521 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 KCTD6Q8NC69 237 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 ZFPM2Q8WW38 1151 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 FATE1Q969F0 183 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 THOC3Q96J01 351 aaKnown RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 FERD3LQ96RJ6 166 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 TRIB3Q96RU7 358 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 NRTNQ99748 197 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 AP1M1Q9BXS5 423 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 XPO4Q9C0E2 1151 aaKnown RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 YIPF3Q9GZM5 350 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 HAUS4Q9H6D7 363 aa10.8□□□□□ -0.68
RTN3-204ENST00000354497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.8□□□□□ -0.68
RTN3-204ENST00000354497 DNMT3AQ9Y6K1 912 aaPredicted RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 DIDO1Q9BTC0 2240 aaKnown RBP10.8□□□□□ -0.68
RTN3-204ENST00000354497 LGALS16A8MUM7 142 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 BTN3A3O00478 584 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 UNC5CO95185 931 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ANP32DO95626 131 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms