RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FRKP42685 505 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PSMC4P43686 418 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RGS7P49802 495 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GMFBP60983 142 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 AKNAD1Q5T1N1 836 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SULT1C3Q6IMI6 304 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ETFRF1Q6IPR1 90 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SLC25A24Q6NUK1 477 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MFSD12Q6NUT3 480 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF367Q7RTV3 350 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 NRARPQ7Z6K4 114 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ADGRD2Q7Z7M1 963 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FOXP4Q8IVH2 680 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MCEMP1Q8IX19 187 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MRPL43Q8N983 215 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 OR52I2Q8NH67 350 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 EXOC6Q8TAG9 804 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 LARP4BQ92615 738 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 LENG9Q96B70 501 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 OXNAD1Q96HP4 312 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HARBI1Q96MB7 349 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GAL3ST4Q96RP7 486 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SLC22A12Q96S37 553 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FAM118BQ9BPY3 351 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 EBF3Q9H4W6 596 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ADARB2Q9NS39 739 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PNPLA3Q9NST1 481 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TBC1D7Q9P0N9 293 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TRPC4Q9UBN4 977 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TRMT6Q9UJA5 497 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ACSL5Q9ULC5 683 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ABT1Q9ULW3 272 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CHKBQ9Y259 395 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 WDR83OSQ9Y284 106 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ATG4BQ9Y4P1 393 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ZCCHC11Q5TAX3 1644 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SMG6Q86US8 1419 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KIR2DS5A0A0G2JLQ3 304 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 C2orf92A0A1B0GVN3 265 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 A0A1B0GVT2 93 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GLTPD2A6NH11 291 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 C1QTNF3-AMACRE9PGA6 284 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 NPIPB8E9PQR5 432 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KIR2DS3K7RE56 304 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SLC30A4O14863 429 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 IFIT3O14879 490 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 JTBO76095 146 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MT-ATP6P00846 226 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CSN3P07498 182 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 OR2T7P0C7T2 308 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CYP11B1P15538 503 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HOXA5P20719 270 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GJB2P29033 226 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RARRES1P49788 294 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HNMTP50135 292 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SELENOVP59797 346 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CRYZQ08257 329 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PDE7AQ13946 482 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FAM153CQ494X1 144 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MACC1Q6ZN28 852 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PPP1R42Q7Z4L9 355 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 C5orf24Q7Z6I8 188 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF410Q86VK4 478 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 LCA5Q86VQ0 697 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 LONP2Q86WA8 852 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DZIP1Q86YF9 867 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GRAMD2AQ8IUY3 354 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DSELQ8IZU8 1212 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 EMC1Q8N766 993 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SMYD1Q8NB12 490 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 OR13J1Q8NGT2 312 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 NCOA7Q8NI08 942 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KIAA1524Q8TCG1 905 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SELENOMQ8WWX9 145 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PIGBQ92521 554 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 N4BP2L2Q92802 583 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PRRX2Q99811 253 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ASCL2Q99929 193 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KXD1Q9BQD3 176 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FOXP1Q9H334 677 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CUEDC2Q9H467 287 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 LRRC4Q9HBW1 653 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PARD6AQ9NPB6 346 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RABL2AQ9UBK7 228 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.57□□□□□ -2.165e-6■□□□□ 10.3
BRCA1-202ENST00000354071 RAI2Q9Y5P3 530 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FAM205AQ6ZU69 1335 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PCDH11YQ9BZA8 1340 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HYKKA2RU49 373 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 OR2M5A3KFT3 312 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 UBE2Q2LH0YL09 131 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CLDN4O14493 209 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ACSL4O60488 711 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TPBGLP0DKB5 382 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ITGA2P17301 1181 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MYF6P23409 242 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PTGS2P35354 604 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ARCN1P48444 511 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 IFNAR2P48551 515 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TAS2R38P59533 333 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms