RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 GLRA3O75311 464 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SIX3O95343 332 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 LDOC1O95751 146 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 GSTA1P08263 222 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 DHRS4L1P0CG22 281 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SPTBP11277 2137 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SLC2A4P14672 509 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ACP1P24666 158 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ARRB2P32121 409 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 GDF5P43026 501 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 RPIAP49247 311 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 RAB28P51157 221 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PDX1P52945 283 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 GFERP55789 205 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 TAP2Q03519 686 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PCLAFQ15004 111 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 AGTRAPQ6RW13 159 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SUSD1Q6UWL2 747 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ZNF574Q6ZN55 896 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SLC9B2Q86UD5 537 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 OR4E2Q8NGC2 313 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 HMGCLL1Q8TB92 370 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 IFI44Q8TCB0 444 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PYCR2Q96C36 320 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 FBXL8Q96CD0 374 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PRR11Q96HE9 360 aaPredicted RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 MRPL57Q9BQC6 102 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 NUDT22Q9BRQ3 303 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 MECRQ9BV79 373 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PITPNM3Q9BZ71 974 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 MLXIPLQ9NP71 852 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 FTSJ1Q9UET6 329 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 PTBP2Q9UKA9 531 aaKnown RBP12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 RNF112Q9ULX5 631 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 HEBP2Q9Y5Z4 205 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 ACTL7BQ9Y614 415 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
ERGIC3-202ENST00000348547 IGKV1-8A0A0C4DH67 115 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 A0A1B0GTL3 188 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 TMEM120BA0PK00 339 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■□□□□ 11
ERGIC3-202ENST00000348547 KIF1CO43896 1103 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 DKK1O94907 266 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CHRM5P08912 532 aaPredicted RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CKMT2P17540 419 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CCR10P46092 362 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CAPZBP47756 277 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 PNLIPRP1P54315 467 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CCL7P80098 99 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 CDKL1Q00532 357 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 TSNAXIP1Q2TAA8 658 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ZYG11AQ6WRX3 759 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 LCA5Q86VQ0 697 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 AMIGO1Q86WK6 493 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 KLHDC8AQ8IYD2 350 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 OR2L8Q8NGY9 312 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 OR56A3Q8NH54 315 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 STAG3L4Q8TBR4 150 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 MDM1Q8TC05 714 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 UBTD2Q8WUN7 234 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ZFPM2Q8WW38 1151 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 LCN9Q8WX39 176 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 RAD51AP1Q96B01 352 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 INTS7Q9NVH2 962 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 SENP1Q9P0U3 644 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 DCDC2Q9UHG0 476 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 IGF2RP11717 2491 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 DSPP15924 2871 aaKnown RBP12.31□□□□□ -0.44
ERGIC3-202ENST00000348547 OR5K3A6NET4 321 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 RHPN2P1A8MT19 583 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 SUPT3HB4E1H0 165 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 SLC30A4O14863 429 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 FOXD2O60548 495 aaPredicted RBP12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 SUPT3HO75486 399 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 UBXN7O94888 489 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 PROS1P07225 676 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 POLR2CP19387 275 aaPredicted RBP12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 CYP2A7P20853 494 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 NDUFS1P28331 727 aa12.3□□□□□ -0.44
ERGIC3-202ENST00000348547 ALDH4A1P30038 563 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms