RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TRA2AQ13595 282 aaKnown RBP eCLIP13.42□□□□□ -0.26
TPM4-202ENST00000344824 METRNLQ641Q3 311 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 PLXDC1Q8IUK5 500 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 RBM12BQ8IXT5 1001 aaKnown RBP13.42□□□□□ -0.26
TPM4-202ENST00000344824 ELMO1Q92556 727 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 LINC00615Q96LM1 132 aaPredicted RBP13.42□□□□□ -0.26
TPM4-202ENST00000344824 SLC30A3Q99726 388 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 UNKQ9C0B0 810 aaKnown RBP13.42□□□□□ -0.26
TPM4-202ENST00000344824 GPAMQ9HCL2 828 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 OCIAD1Q9NX40 245 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 SENP1Q9P0U3 644 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
TPM4-202ENST00000344824 ACSL5Q9ULC5 683 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
TPM4-202ENST00000344824 A0A087WV48 116 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 CDRT15L2A8MXV6 281 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 H3BMM5 538 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 QSOX1O00391 747 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 COPEO14579 308 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 CAPN5O15484 640 aaPredicted RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 FTH1P02794 183 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 SLC35E2BP0CK96 405 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 CRABP2P29373 138 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 MAGEA12P43365 314 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 SEPHS1P49903 392 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 ILF2Q12905 390 aaKnown RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 TMEM164Q5U3C3 297 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 BROXQ5VW32 411 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 WDR74Q6RFH5 385 aaPredicted RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 FAM92BQ6ZTR7 304 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 CLEC14AQ86T13 490 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 SPATA6LQ8N4H0 392 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 ANKRD42Q8N9B4 389 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 ISL2Q96A47 359 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 UCK1Q9HA47 277 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 OGFRQ9NZT2 677 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 MED16Q9Y2X0 877 aa13.41□□□□□ -0.26
TPM4-202ENST00000344824 SNRNP200O75643 2136 aaKnown RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 MN1Q10571 1320 aaPredicted RBP13.41□□□□□ -0.26
TPM4-202ENST00000344824 AP2A2O94973 939 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 NR1D1P20393 614 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 PDHA2P29803 388 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CCNFP41002 786 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 PPP1CAP62136 330 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CXADRP78310 365 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CSHL1Q14406 222 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
TPM4-202ENST00000344824 UGT3A1Q6NUS8 523 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 PAQR3Q6TCH7 311 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 TBC1D1Q86TI0 1168 aaPredicted RBP13.4□□□□□ -0.26
TPM4-202ENST00000344824 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CPNE9Q8IYJ1 553 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 GIMAP7Q8NHV1 300 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 MGARPQ8TDB4 240 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 KCNJ9Q92806 393 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 APOPT1Q96IL0 206 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CABS1Q96KC9 395 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 TSNARE1Q96NA8 513 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 PANX3Q96QZ0 392 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 FERD3LQ96RJ6 166 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 CTRCQ99895 268 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 HGH1Q9BTY7 390 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 TSSK1BQ9BXA7 367 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 C12orf65Q9H3J6 166 aaKnown RBP13.4□□□□□ -0.26
TPM4-202ENST00000344824 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 ACOT9Q9Y305 439 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
TPM4-202ENST00000344824 A0A087X1B8 175 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 C17orf113A0A1B0GUU1 675 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 C9orf172C9J069 976 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 F8W8V4 182 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 KIF1CO43896 1103 aaKnown RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 CCDC166P0CW27 439 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 FGF3P11487 239 aaPredicted RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 CCR7P32248 378 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 CLCN7P51798 805 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 PPP2R2AP63151 447 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 TLE3Q04726 772 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 FOXM1Q08050 763 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 SQSTM1Q13501 440 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 C16orf46Q6P387 395 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 KLHL35Q6PF15 583 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 TMEM207Q6UWW9 146 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms