RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NPLQ9BXD5 320 aaPredicted RBP17.71■□□□□ 0.42
SMC4-201ENST00000344722 TIGARQ9NQ88 270 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 ERVK-18Q9QC07 812 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 MON2Q7Z3U7 1717 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 OR2B3O76000 313 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 DHRS4L1P0CG22 281 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 ENGP17813 658 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 ZNF234Q14588 700 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 FAM117BQ6P1L5 589 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 KLHL24Q6TFL4 600 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 TMEM199Q8N511 208 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 GEMIN6Q8WXD5 167 aaKnown RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 MSANTD3Q96H12 275 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 EMC3Q9P0I2 261 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 FBXO9Q9UK97 447 aaPredicted RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 B3GNT3Q9Y2A9 372 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 H7C2Y5 167 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PAPSS2O95340 614 aaPredicted RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 NUDT14O95848 222 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 F7P08709 466 aaPredicted RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 CD40LGP29965 261 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 TXNL4AP83876 142 aaKnown RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 ZNF678Q5SXM1 525 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 MINDY1Q8N5J2 469 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 CNIH3Q8TBE1 160 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 TMEM80Q96HE8 168 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 GPR20Q99678 358 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 SOX17Q9H6I2 414 aaPredicted RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 INMT-MINDY4F8WBC2 141 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 LCN1P31025 176 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PNCKQ6P2M8 343 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PAQR3Q6TCH7 311 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 OXR1Q8N573 874 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 CEP76Q8TAP6 659 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 GAB3Q8WWW8 586 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 JPH3Q8WXH2 748 aaPredicted RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 BARD1Q99728 777 aaKnown RBP17.7■□□□□ 0.42
SMC4-201ENST00000344722 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.421e-147■■■■■ 345.5
SMC4-201ENST00000344722 ITM2CQ9NQX7 267 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PCDHB3Q9Y5E6 796 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 MAU2Q9Y6X3 613 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 M0R233 179 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 NUAK1O60285 661 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 HTR2BP41595 481 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 CHRNA4P43681 627 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 NANOGP8Q6NSW7 305 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 PM20D2Q8IYS1 436 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 CLEC4CQ8WTT0 213 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 CDK15Q96Q40 435 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 NANOGQ9H9S0 305 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 SMURF1Q9HCE7 757 aa17.7■□□□□ 0.42
SMC4-201ENST00000344722 IQCMA0A1B0GVH7 501 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 OR7A10O76100 309 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 HLA-DPB1P04440 258 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 C8GP07360 202 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 EMX2Q04743 252 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 GANABQ14697 944 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 RIMKLBQ9ULI2 386 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 CAPN14A8MX76 684 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 DCLK1O15075 740 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 CRYBB1P53674 252 aaPredicted RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 RPS3AP61247 264 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 SKP1P63208 163 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 ATP13A5Q4VNC0 1218 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 HMBOX1Q6NT76 420 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 OR8J3Q8NGG0 315 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 IL4I1Q96RQ9 567 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 WACQ9BTA9 647 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 PDGFDQ9GZP0 370 aaPredicted RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 MRM3Q9HC36 420 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 TMLHEQ9NVH6 421 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 FLRT1Q9NZU1 646 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 FZD4Q9ULV1 537 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 GSTT2P0CG29 244 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 FBXO27Q8NI29 283 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 GRIN3AQ8TCU5 1115 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 ADAMTS15Q8TE58 950 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 SACM1LQ9NTJ5 587 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 SNX10Q9Y5X0 201 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 INSIG1O15503 277 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 SAGP10523 405 aaPredicted RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 RGS8P57771 180 aaPredicted RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 EIF5AP63241 154 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 PIGFQ07326 219 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 LARS2Q15031 903 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 PAFAH1B3Q15102 231 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 PCSK9Q8NBP7 692 aaKnown RBP17.69■□□□□ 0.42
SMC4-201ENST00000344722 TMEM203Q969S6 136 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 FAM118AQ9NWS6 357 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 HSPE1-MOB4S4R3N1 261 aa17.69■□□□□ 0.42
SMC4-201ENST00000344722 FFAR2O15552 330 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms