RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CHST8Q9H2A9 424 aa19.32■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM60AQ9NP50 221 aa19.32■□□□□ 0.68
CEACAM3-201ENST00000344550 PCYOX1Q9UHG3 505 aa19.32■□□□□ 0.68
CEACAM3-201ENST00000344550 ANAPC2Q9UJX6 822 aa19.32■□□□□ 0.68
CEACAM3-201ENST00000344550 PADI2Q9Y2J8 665 aa19.32■□□□□ 0.68
CEACAM3-201ENST00000344550 C9J4A7 227 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 ZNF749O43361 778 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 SLC28A2O43868 658 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 C1orf105O95561 183 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 PKMP14618 531 aaKnown RBP19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 HSD17B2P37059 387 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 TTLL9Q3SXZ7 439 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 ZC3H12BQ5HYM0 836 aaKnown RBP19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 RHBDD2Q6NTF9 364 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 TCTN3Q6NUS6 607 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM199XQ6PEV8 388 aaPredicted RBP19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 CES3Q6UWW8 571 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 SYDE1Q6ZW31 735 aaPredicted RBP19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 CENPUQ71F23 418 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 SYTL1Q8IYJ3 562 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 LINC01555Q8NAE3 123 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 CFAP61Q8NHU2 1237 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 NRTNQ99748 197 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 AKIRIN1Q9H9L7 192 aaPredicted RBP19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 SPATA7Q9P0W8 599 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 MAN2B2Q9Y2E5 1009 aa19.31■□□□□ 0.68
CEACAM3-201ENST00000344550 ZCWPW2A0A1B0GU75 182 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 CDC14CA4D256 554 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 SMAPO00193 183 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 ZSCAN9O15535 394 aaPredicted RBP19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 RFPL1O75677 317 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 TTC4O95801 387 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 CHRM3P20309 590 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 PEBP1P30086 187 aaKnown RBP19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 FMO4P31512 558 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 ARHGAP19Q14CB8 494 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 PPP1R7Q15435 360 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 ZIC1Q15915 447 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 LONRF1Q17RB8 773 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 YOD1Q5VVQ6 348 aaPredicted RBP19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 LMNTD1Q8N9Z9 388 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 KCNJ9Q92806 393 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 ZNF669Q96BR6 464 aaPredicted RBP19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 ABHD17AQ96GS6 310 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 PDLIM2Q96JY6 352 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 SIGLEC10Q96LC7 697 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 IP6K3Q96PC2 410 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 KCNF1Q9H3M0 494 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM114A2Q9NRY5 505 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 TCFL5Q9UL49 500 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 SPTBP11277 2137 aa19.3■□□□□ 0.68
CEACAM3-201ENST00000344550 E5RI56 91 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 PRICKLE3O43900 615 aaPredicted RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 CAPN1P07384 714 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 FURINP09958 794 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 ARSFP54793 590 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 NCF4Q15080 339 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 CYP2A13Q16696 494 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 LACTB2Q53H82 288 aaPredicted RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 RNASEH2BQ5TBB1 312 aaKnown RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 ATP1A1-AS1Q5TC04 95 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 ZNF385CQ66K41 422 aaPredicted RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 ZNF470Q6ECI4 717 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 TRIM73Q86UV7 250 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 ZBTB2Q8N680 514 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 FBXO15Q8NCQ5 510 aaPredicted RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 SKA2Q8WVK7 121 aaPredicted RBP19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 DLG3Q92796 817 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 KLHL25Q9H0H3 589 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 CCDC68Q9H2F9 335 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 EURLQ9NYK6 297 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 PLAGL1Q9UM63 463 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 SNX7Q9UNH6 387 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 CRYL1Q9Y2S2 319 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM169AQ9Y6X4 670 aa19.29■□□□□ 0.68
CEACAM3-201ENST00000344550 CTAGE9A4FU28 777 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 ZNF839A8K0R7 811 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 GOLGA8KD6RF30 607 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 GOLGA8TH3BQL2 631 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 EIF3FO00303 357 aaPredicted RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 SRPX2O60687 465 aaPredicted RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 ENO3P13929 434 aaPredicted RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 PTK6Q13882 451 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 SF1Q15637 639 aaKnown RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 TCTE1Q5JU00 501 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 PAPD7Q5XG87 772 aaKnown RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM198BQ6UWH4 519 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 PRICKLE2Q7Z3G6 844 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 ENDOVQ8N8Q3 282 aaKnown RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 ADAMTS17Q8TE56 1095 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 NACC2Q96BF6 587 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 FAM167BQ9BTA0 163 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 NDC1Q9BTX1 674 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 TRMT1Q9NXH9 659 aaKnown RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 RNF14Q9UBS8 474 aa19.28■□□□□ 0.68
CEACAM3-201ENST00000344550 NIPSNAP2O75323 286 aa19.27■□□□□ 0.68
CEACAM3-201ENST00000344550 PSIP1O75475 530 aaKnown RBP19.27■□□□□ 0.68
CEACAM3-201ENST00000344550 ONECUT2O95948 504 aa19.27■□□□□ 0.68
CEACAM3-201ENST00000344550 IGHEP01854 428 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms