RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 WDR37Q9Y2I8 494 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 PCDHGA7Q9Y5G6 932 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ULK1O75385 1050 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CEACAM5P06731 702 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 GABRG2P18507 467 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 THOP1P52888 689 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CDC16Q13042 620 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CHIT1Q13231 466 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TCEA2Q15560 299 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 ATP6AP1LQ52LC2 224 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 WASHC2DQ5SRD0 308 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 SUSD1Q6UWL2 747 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 LRRTM4Q86VH4 590 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 HM13Q8TCT9 377 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ZNF514Q96K75 400 aaPredicted RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TCRBV21S2A2A0A5A6 115 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 NRP2O60462 931 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 IDO1P14902 403 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 HALP42357 657 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 TPMTP51580 245 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 MTTPP55157 894 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 STX1BP61266 288 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 PRKG2Q13237 762 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 IL23RQ5VWK5 629 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 EFL1Q7Z2Z2 1120 aaKnown RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 TRIM46Q7Z4K8 759 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 LRRC56Q8IYG6 542 aaPredicted RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 L3MBTL4Q8NA19 623 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 OR56A3Q8NH54 315 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 PNMA8BQ9ULN7 279 aaPredicted RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 POMPQ9Y244 141 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 GON4LQ3T8J9 2241 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 E7ENX8 843 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 ANKRD28O15084 1053 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 VPS4BO75351 444 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 ACP5P13686 325 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 SLC2A4P14672 509 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 IL9P15248 144 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 RPL38P63173 70 aaKnown RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 ART3Q13508 389 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 DOC2AQ14183 400 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 PTGR1Q14914 329 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 KIAA0040Q15053 153 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 METRNLQ641Q3 311 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 SPATA19Q7Z5L4 167 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 FBXW8Q8N3Y1 598 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 NEIL2Q969S2 332 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 CDX2Q99626 313 aaPredicted RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 BRINP2Q9C0B6 783 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 IL1RL2Q9HB29 575 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 RIC8BQ9NVN3 520 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 ASF1AQ9Y294 204 aa13.18□□□□□ -0.3
CDC42-202ENST00000344548 POLR3HQ9Y535 204 aaPredicted RBP13.18□□□□□ -0.3
CDC42-202ENST00000344548 PRAMEF33A0A0G2JMD5 474 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 PABPN1LA6NDY0 278 aaKnown RBP13.17□□□□□ -0.3
CDC42-202ENST00000344548 TBPL1P62380 186 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 MS4A2Q01362 244 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 TSTA3Q13630 321 aaPredicted RBP13.17□□□□□ -0.3
CDC42-202ENST00000344548 GAS6Q14393 721 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
CDC42-202ENST00000344548 GSTA3Q16772 222 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 PIGGQ5H8A4 983 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 CATSPEREQ5SY80 951 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 KIAA1161Q6NSJ0 714 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 PGAM4Q8N0Y7 254 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 OXR1Q8N573 874 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 HIPK4Q8NE63 616 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 MRPL1Q9BYD6 325 aaKnown RBP13.17□□□□□ -0.3
CDC42-202ENST00000344548 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 KCNK6Q9Y257 313 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
CDC42-202ENST00000344548 MRASO14807 208 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 MYCLP1P12525 358 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 NPPBP16860 134 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 XRCC1P18887 633 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 ACTR3P61158 418 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 TAP2Q03519 686 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 EMX2Q04743 252 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 STX5Q13190 355 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 CCNIQ14094 377 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SF1Q15637 639 aaKnown RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms