RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 RPS9P46781 194 aaKnown RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 PHC1P78364 1004 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 MAD2L1Q13257 205 aaPredicted RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 RAB39AQ14964 217 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 C16orf72Q14CZ0 275 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 MAPKAPK3Q16644 382 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 ZNF648Q5T619 568 aaPredicted RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 CACHD1Q5VU97 1274 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 GPR107Q5VW38 600 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 ELMSAN1Q6PJG2 1045 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 CROCCP3Q8IVE0 287 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 FAM86B1Q8N7N1 296 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 BEND7Q8N7W2 519 aaPredicted RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 NAT16Q8N8M0 369 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 CYB5D2Q8WUJ1 264 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 PAWRQ96IZ0 340 aaKnown RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 SLC29A3Q9BZD2 475 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 MTG2Q9H4K7 406 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 HELZP42694 1942 aaKnown RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 KCNE1BA0A087WTH5 132 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 CARNS1A5YM72 827 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 H3BMQ9 156 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 SGTAO43765 313 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 NUAK1O60285 661 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 LDLRP01130 860 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 PTCHD3Q3KNS1 767 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 LY6G5CQ5SRR4 150 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 PATL1Q86TB9 770 aaKnown RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 MIPOL1Q8TD10 442 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 SNRNP27Q8WVK2 155 aaKnown RBP19.6■□□□□ 0.73
SPG7-202ENST00000341316 COG8Q96MW5 612 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 POLR1BQ9H9Y6 1135 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 NTN4Q9HB63 628 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 C8orf4Q9NR00 106 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 ASIC5Q9NY37 505 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 CDH7Q9ULB5 785 aa19.6■□□□□ 0.73
SPG7-202ENST00000341316 SNAP29O95721 258 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 CDH1P12830 882 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 PFKLP17858 780 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 YAP1P46937 504 aaKnown RBP19.59■□□□□ 0.73
SPG7-202ENST00000341316 SLC6A12P48065 614 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 CDKL4Q5MAI5 379 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 PLPP4Q5VZY2 271 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 Q6ZVL8 140 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 OR10A6Q8NH74 314 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 VPS50Q96JG6 964 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 SPHK2Q9NRA0 654 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 TDP1Q9NUW8 608 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 ZNF639Q9UID6 485 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 SH3PXD2BA1X283 911 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 ZBBXA8MT70 800 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 TTC34A8MYJ7 566 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 EFCAB14O75071 495 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 B3GALT4O96024 378 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 KRT6AP02538 564 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 KRT6BP04259 564 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 C8GP07360 202 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 ANXA6P08133 673 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 KRT6CP48668 564 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 NTHL1P78549 312 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 CYP4F3Q08477 520 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 TMEM26Q6ZUK4 368 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 SELENOMQ8WWX9 145 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 THUMPD3Q9BV44 507 aaKnown RBP19.59■□□□□ 0.73
SPG7-202ENST00000341316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.59■□□□□ 0.73
SPG7-202ENST00000341316 SLC22A14Q9Y267 594 aa19.59■□□□□ 0.73
SPG7-202ENST00000341316 WASH3PC4AMC7 463 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 GFYI3L273 518 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 EIF3FO00303 357 aaPredicted RBP19.58■□□□□ 0.73
SPG7-202ENST00000341316 UPK1AO00322 258 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 LEFTY1O75610 366 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 IL6P05231 212 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 ITPKAP23677 461 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 TACR1P25103 407 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 NFKBIAP25963 317 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 DCKP27707 260 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 ETV3P41162 512 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 PLCL1Q15111 1095 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 KCTD8Q6ZWB6 473 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 GLB1L3Q8NCI6 653 aaPredicted RBP19.58■□□□□ 0.73
SPG7-202ENST00000341316 ZNF548Q8NEK5 533 aaPredicted RBP19.58■□□□□ 0.73
SPG7-202ENST00000341316 OR2T12Q8NG77 320 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 ITFG1Q8TB96 612 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 FRS2Q8WU20 508 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 FIG4Q92562 907 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 ZSWIM3Q96MP5 696 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 OR52E6Q96RD3 313 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 NAA50Q9GZZ1 169 aaKnown RBP19.58■□□□□ 0.73
SPG7-202ENST00000341316 PKD2L2Q9NZM6 624 aa19.58■□□□□ 0.73
SPG7-202ENST00000341316 TMEM202A6NGA9 273 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 PCNAP12004 261 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 EPHA5P54756 1037 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 NKG7Q16617 165 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 ARSIQ5FYB1 569 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 ZDHHC20Q5W0Z9 365 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 TMEM214Q6NUQ4 689 aaKnown RBP19.58■□□□□ 0.72
SPG7-202ENST00000341316 CHST15Q7LFX5 561 aaPredicted RBP19.58■□□□□ 0.72
SPG7-202ENST00000341316 LRRC70Q7Z2Q7 622 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 PHACTR4Q8IZ21 702 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 SLC22A15Q8IZD6 547 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms