RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PCYOX1LQ8NBM8 494 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 NRG4Q8WWG1 115 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 LINC00615Q96LM1 132 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 PPP3R2Q96LZ3 170 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC29A3Q9BZD2 475 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 A0A1W2PQU0 124 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 ASPDHA6ND91 283 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 MGAT4DA6NG13 374 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 E7EQ34 232 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC28A1O00337 649 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 BAG2O95816 211 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 ASGR2P07307 311 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 CD22P20273 847 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 CASP2P42575 452 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 POLR2JP52435 117 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC34A1Q06495 639 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 RCAN2Q14206 197 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 TIGD2Q4W5G0 525 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC44A3Q8N4M1 653 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 FZD3Q9NPG1 666 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 CD93Q9NPY3 652 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 GMPR2Q9P2T1 348 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 TRIOBPQ9H2D6 2365 aa21.8■■□□□ 1.08
PDLIM2-203ENST00000339162 BBIP1A8MTZ0 92 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 CD72P21854 359 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 IRF8Q02556 426 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 COL19A1Q14993 1142 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 XKR6Q5GH73 641 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 L3MBTL4Q8NA19 623 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 EBF2Q9HAK2 575 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 SPAG4Q9NPE6 437 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 C17orf113A0A1B0GUU1 675 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 PRORSD1PA6NEY8 169 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 ANPEPP15144 967 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 GNPDA1P46926 289 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC7A2P52569 658 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 GRIK2Q13002 908 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 FLOT2Q14254 428 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 PAGE3Q5JUK9 113 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 C8orf82Q6P1X6 216 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 AMZ2Q86W34 360 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 CHCHD4Q8N4Q1 142 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 PHC3Q8NDX5 983 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 HM13Q8TCT9 377 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 ZNF480Q8WV37 535 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 ATL1Q8WXF7 558 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 PCDHAC1Q9H158 963 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 WDR26Q9H7D7 661 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 LRTM1Q9HBL6 345 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 S100A14Q9HCY8 104 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 ZIM2Q9NZV7 527 aa21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 CFAP20Q9Y6A4 193 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3DA0A087WVF3 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3IA0A087WXS9 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3EA0A087X179 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3KA0A087X1G2 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 A0A1W2PP18 115 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3FA6NER0 549 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 CCDC154A6NI56 674 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3LB9A6J9 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3HP0C7X1 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 AP2B1P63010 937 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 SGCGQ13326 291 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3GQ6DHY5 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3CQ6IPX1 549 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 SYTL1Q8IYJ3 562 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TBC1D3Q8IZP1 549 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TP53I13Q8NBR0 393 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 SLAMF8Q9P0V8 285 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 STOML1Q9UBI4 398 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 SNX6Q9UNH7 406 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 MRPL19P49406 292 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 ADPRHP54922 357 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 RPS21P63220 83 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 GRSF1Q12849 480 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 GGTA1PQ4G0N0 100 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 LRRTM4Q86VH4 590 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 RALGPS2Q86X27 583 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 ROPN1LQ96C74 230 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 NRTNQ99748 197 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 TEX101Q9BY14 249 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 ZDHHC5Q9C0B5 715 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 PLAGL1Q9UM63 463 aa21.78■■□□□ 1.08
PDLIM2-203ENST00000339162 FXYD1O00168 92 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 ANKRD28O15084 1053 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 PLRG1O43660 514 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 NARSO43776 548 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 RNGTTO60942 597 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 FUCA1P04066 466 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 RPL10P27635 214 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 ACADLP28330 430 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 DGKQP52824 942 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 DOC2AQ14183 400 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 CCDC85BQ15834 202 aaPredicted RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 HACD2Q6Y1H2 254 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 LIX1Q8N485 282 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 BHLHE22Q8NFJ8 381 aaPredicted RBP21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 CLHC1Q8NHS4 586 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 SLC17A9Q9BYT1 436 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 OR52A5Q9H2C5 316 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms