RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CDH12P55289 794 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 NFKB2Q00653 900 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 GALNT1Q10472 559 aaPredicted RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 ABRQ12979 859 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 TIGD6Q17RP2 521 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 USP39Q53GS9 565 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 VARS2Q5ST30 1063 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 XAF1Q6GPH4 301 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 CEP68Q76N32 757 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 C11orf96Q7Z7L8 435 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 ARMC8Q8IUR7 673 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 LRRC49Q8IUZ0 686 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 SIX5Q8N196 739 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 DEPDC7Q96QD5 511 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 FLRT1Q9NZU1 646 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 BTBD3Q9Y2F9 522 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 RBM47A0AV96 593 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 ANKRD66B4E2M5 251 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 PABPC1P11940 636 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 TACR1P25103 407 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 GP2P55259 537 aaKnown RBP13.82□□□□□ -0.2
PCDH8-201ENST00000338862 SPIBQ01892 262 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 IRF8Q02556 426 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 FOXM1Q08050 763 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 PDPRQ8NCN5 879 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 RHEBL1Q8TAI7 183 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 TMEM203Q969S6 136 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 TAS2R16Q9NYV7 291 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
PCDH8-201ENST00000338862 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF638Q14966 1978 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 MGAT4DA6NG13 374 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 GJB5O95377 273 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CLDN7O95471 211 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 FABP3P05413 133 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ENGP17813 658 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 UMODL1-AS1Q8N2C9 162 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PYURFQ96I23 114 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 NUSAP1Q9BXS6 441 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ALOXE3Q9BYJ1 711 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 SLC6A13Q9NSD5 602 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ENPP5Q9UJA9 477 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 SEC14L2O76054 403 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PAPSS2O95340 614 aaPredicted RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 HOXB8P17481 243 aaPredicted RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CTSKP43235 329 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 KIR3DL1P43629 444 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 GATMP50440 423 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PLD1Q13393 1074 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PARP15Q460N3 678 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 OR2T5Q6IEZ7 315 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 RGMBQ6NW40 437 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PHYKPLQ8IUZ5 450 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 SCAIQ8N9R8 606 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 LMNTD1Q8N9Z9 388 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 OR2T29Q8NH02 315 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CD200R1Q8TD46 325 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 MUC13Q9H3R2 512 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CTPS2Q9NRF8 586 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 PRKAB1Q9Y478 270 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CLIC1O00299 241 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 TPST2O60704 377 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 TBL1XO60907 577 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CSF2P04141 144 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 BCKDHAP12694 445 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 GADD45AP24522 165 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 RPL34P49207 117 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ACSM2AQ08AH3 577 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ACSM2BQ68CK6 577 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 ANKS3Q6ZW76 656 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CLECL1Q8IZS7 167 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 OR5AK3PQ8NH89 298 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 CNPPD1Q9BV87 410 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 YTHDF1Q9BYJ9 559 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 TLR9Q9NR96 1032 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 INTS6Q9UL03 887 aaKnown RBP13.81□□□□□ -0.2
PCDH8-201ENST00000338862 DLGAP4Q9Y2H0 992 aa13.81□□□□□ -0.2
PCDH8-201ENST00000338862 MROH6A6NGR9 719 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 E2F3O00716 465 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TPD52L2O43399 206 aaKnown RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 SCELO95171 688 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 APOL3O95236 402 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 PRAMEF12O95522 483 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 C1QCP02747 245 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ANXA5P08758 320 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 DNAJB1P25685 340 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 CORO1AP31146 461 aaKnown RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 RPP38P78345 283 aaKnown RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 DEPDC1Q5TB30 811 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 DLEU7Q6UYE1 221 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 PLEKHG7Q6ZR37 379 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms