RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CD9P21926 228 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PSMB5P28074 263 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 EIF3BP55884 814 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 CCZ1BP86790 482 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 CCZ1P86791 482 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PRR30Q53SZ7 412 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 CTSL3PQ5NE16 218 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 FIGLAQ6QHK4 219 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 LRRC8AQ8IWT6 810 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 IRAK4Q9NWZ3 460 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PLCL2Q9UPR0 1127 aa12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 PTRH2Q9Y3E5 179 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-201ENST00000338427 NIPSNAP2O75323 286 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 APOA4P06727 396 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 ITGAXP20702 1163 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 RAB28P51157 221 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 PGDP52209 483 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 DCDP81605 110 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 PLOD1Q02809 727 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 FASTKQ14296 549 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 SF1Q15637 639 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 RBMXL3Q8N7X1 1067 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 BIRC8Q96P09 236 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 KIFC1Q9BW19 673 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 IFT80Q9P2H3 777 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC39A10Q9ULF5 831 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 CRYL1Q9Y2S2 319 aa12.85□□□□□ -0.35
NUDCD3-201ENST00000338427 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 CTSVO60911 334 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 ALOX12BO75342 701 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 CEACAM4O75871 244 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 MED26O95402 600 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 C1orf105O95561 183 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 UMODP07911 640 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 HBQ1P09105 142 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 CCDC175P0C221 793 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 GNLYP22749 145 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 PPARGP37231 505 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 TTPAP49638 278 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 SSPNQ14714 243 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 CNSTQ6PJW8 725 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 SHISA6Q6ZSJ9 500 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 CAND1Q86VP6 1230 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 AMER2Q8N7J2 671 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 DENND1AQ8TEH3 1009 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 SKA2Q8WVK7 121 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 SEC14L1Q92503 715 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 C19orf60Q96EN9 201 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 SLC30A3Q99726 388 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 MIPEPQ99797 713 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 IL22Q9GZX6 179 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 ZBTB20Q9HC78 741 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 EIF2B3Q9NR50 452 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 AP1M2Q9Y6Q5 423 aa12.84□□□□□ -0.35
NUDCD3-201ENST00000338427 LOC105369274A0A096LPK9 316 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 LOC102723532A0A0G2JNH3 316 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 A0A1W2PPV9 198 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CLEC18AA5D8T8 446 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 C9J4A7 227 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 GOLGA8MH3BSY2 632 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 RASGRF2O14827 1237 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 KRT14P02533 472 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 GCGRP47871 477 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 OR1D4P47884 311 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CD97P48960 835 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 GPS1Q13098 491 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 PAPD7Q5XG87 772 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 FRMPD2BQ6IN97 320 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CLEC18BQ6UXF7 455 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 UNC5DQ6UXZ4 953 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms