RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 XAGE5Q8WWM1 108 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ISL2Q96A47 359 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RPRD1BQ9NQG5 326 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SCN8AQ9UQD0 1980 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 IGLV3-25P01717 112 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 HSMCR30P0CW71 290 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SLC16A1P53985 500 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ERVK-21P61565 698 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 PLEKHS1Q5SXH7 462 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 NANOGP8Q6NSW7 305 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 FBXO46Q6PJ61 603 aaPredicted RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 KLK6Q92876 244 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 USP7Q93009 1102 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ZUFSPQ96AP4 578 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 PTERQ96BW5 349 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 TRMT2BQ96GJ1 504 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RIPOR3Q96MK2 946 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 TRIT1Q9H3H1 467 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SYNDIG1Q9H7V2 258 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 NANOGQ9H9S0 305 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 NPPAP01160 153 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 PREPP48147 710 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SLBPQ14493 270 aaKnown RBP eCLIP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RSPO2Q6UXX9 243 aaPredicted RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 LRRTM4Q86VH4 590 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 CPXM2Q8N436 756 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 PHF10Q8WUB8 498 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 TOX2Q96NM4 488 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RASSF1Q9NS23 344 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 PDLIM1O00151 329 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 CAPGP40121 348 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ST13P50502 369 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 FOXA1P55317 472 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 EIF3MQ7L2H7 374 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 THAP5Q7Z6K1 395 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 EXOSC8Q96B26 276 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 VPS35Q96QK1 796 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ITM2CQ9NQX7 267 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RSL24D1Q9UHA3 163 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 MAFFQ9ULX9 164 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 C1DQ13901 141 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ATP13A5Q4VNC0 1218 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 LHX8Q68G74 356 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CRTC1Q6UUV9 634 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CLEC14AQ86T13 490 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SLC15A3Q8IY34 581 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 OR10G6Q8NH81 332 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 LRCH3Q96II8 777 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 TRMT61BQ9BVS5 477 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 TRPS1Q9UHF7 1281 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 OARD1Q9Y530 152 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ITGB4P16144 1822 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 hCG_2039718K7EN88 272 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SCAMP1O15126 338 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 FABP3P05413 133 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ACRV1P26436 265 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ACTR1BP42025 376 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ACTR1AP61163 376 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SPIBQ01892 262 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 GPAT3Q53EU6 434 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MFSD4BQ5TF39 518 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 GALNT5Q7Z7M9 940 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 GALNT13Q8IUC8 556 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CD200R1Q8TD46 325 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BADQ92934 168 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 UBXN10Q96LJ8 280 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 C3orf14Q9HBI5 128 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SHROOM3Q8TF72 1996 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 GSAPA4D1B5 854 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 GSRP00390 522 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 VIPP01282 170 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 APOA1P02647 267 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 AAK1Q2M2I8 961 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 C7orf57Q8NEG2 295 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 C12orf66Q96MD2 445 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MCMBPQ9BTE3 642 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF232Q9UNY5 417 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 DMTF1Q9Y222 760 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PRSS51A0A1B0GVH4 220 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 A0A1W2PRB8 838 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 F11P03951 625 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RGL4Q8IZJ4 473 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 TMCO5AQ8N6Q1 288 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CHST14Q8NCH0 376 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF248Q8NDW4 579 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 NUS1Q96E22 293 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ADI1Q9BV57 179 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PRRG3Q9BZD7 231 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 NOL6Q9H6R4 1146 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 KIAA1551Q9HCM1 1747 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MPC1LP0DKB6 136 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CTGFP29279 349 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 NRIP1P48552 1158 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RGS1Q08116 209 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF805Q5CZA5 627 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PDSS2Q86YH6 399 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CBARPQ8N350 705 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PACRGLQ8N7B6 248 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms