RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 WFS1O76024 890 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 ACP5P13686 325 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 GPX3P22352 226 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 CLDN2P57739 230 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 GRIK2Q13002 908 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 FASTKQ14296 549 aaKnown RBP15.02■□□□□ -0
LIMS1-202ENST00000338045 GSTA3Q16772 222 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 C6orf136Q5SQH8 315 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 CAPRIN2Q6IMN6 1127 aaKnown RBP15.02■□□□□ -0
LIMS1-202ENST00000338045 CHST15Q7LFX5 561 aaPredicted RBP15.02■□□□□ -0
LIMS1-202ENST00000338045 GALNT13Q8IUC8 556 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 DCUN1D3Q8IWE4 304 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 C10orf67Q8IYJ2 551 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 SFRP1Q8N474 314 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 SHDQ96IW2 340 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 RASSF4Q9H2L5 321 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 MMADHCQ9H3L0 296 aaPredicted RBP15.02■□□□□ -0
LIMS1-202ENST00000338045 FGF22Q9HCT0 170 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 SDR39U1Q9NRG7 319 aaPredicted RBP15.02■□□□□ -0
LIMS1-202ENST00000338045 KLQ9UEF7 1012 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 SUFUQ9UMX1 484 aa15.02■□□□□ -0
LIMS1-202ENST00000338045 LSM1O15116 133 aaKnown RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 ULK1O75385 1050 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 IDO1P14902 403 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 CCR5P51681 352 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 STX1BP61266 288 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 ERVK-8P63133 956 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 E2F2Q14209 437 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 NFATC4Q14934 902 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 ATP6AP1LQ52LC2 224 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 SWT1Q5T5J6 900 aaKnown RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 LIPJQ5W064 366 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 ANO7Q6IWH7 933 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 LRRC56Q8IYG6 542 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 TMEM145Q8NBT3 493 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 RAD51AP1Q96B01 352 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 NELL2Q99435 816 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 SGPP1Q9BX95 441 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 MRPL40Q9NQ50 206 aaKnown RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 AIG1Q9NVV5 245 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 CIDEBQ9UHD4 219 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 GPR45Q9Y5Y3 372 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 TRIOO75962 3097 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 PRSS38A1L453 326 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 MEI4A8MW99 385 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 SLC28A1O00337 649 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 IFRD1O00458 451 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 FFAR3O14843 346 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 GPR42O15529 346 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 APBB3O95704 486 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 KRT6AP02538 564 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 KRT6BP04259 564 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 RPN2P04844 631 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 ERGP11308 486 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 EZRP15311 586 aaKnown RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 KELP23276 732 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 AKT2P31751 481 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 KRT6CP48668 564 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 CHIT1Q13231 466 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 UBXN2BQ14CS0 331 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 MAPRE2Q15555 327 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 CPSF6Q16630 551 aaKnown RBP eCLIP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 SMU1Q2TAY7 513 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 GCNT7Q6ZNI0 430 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 OR5AR1Q8NGP9 310 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 OR5K2Q8NHB8 316 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 MED8Q96G25 268 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 HBEGFQ99075 208 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 BRINP2Q9C0B6 783 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 EBF2Q9HAK2 575 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 FARSBQ9NSD9 589 aaKnown RBP15.01□□□□□ -0.01
LIMS1-202ENST00000338045 GPRC5BQ9NZH0 403 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 PSMD13Q9UNM6 376 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 HS3ST3A1Q9Y663 406 aa15.01□□□□□ -0.01
LIMS1-202ENST00000338045 SERTM1A2A2V5 107 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 FAM170BA6NMN3 283 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 E7ENX8 843 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 H0Y8X5 98 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 TOR1BO14657 336 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 MGRN1O60291 552 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 IGHV4-34P06331 123 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 SLC35G4P0C7Q5 338 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 JUPP14923 745 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 OXTRP30559 389 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 CASP2P42575 452 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 CLCNKAP51800 687 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 DIO3P55073 304 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 TBPL1P62380 186 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 YPEL5P62699 121 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 MXRA7P84157 204 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 SLC25A3Q00325 362 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 TAP2Q03519 686 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 AGKQ53H12 422 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 KIAA0895LQ68EN5 471 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 CAPN13Q6MZZ7 669 aaPredicted RBP15□□□□□ -0.01
LIMS1-202ENST00000338045 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
LIMS1-202ENST00000338045 FUNDC1Q8IVP5 155 aa15□□□□□ -0.01
LIMS1-202ENST00000338045 SYTL1Q8IYJ3 562 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms