RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLC30A2Q9BRI3 323 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 UQCC2Q9BRT2 126 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 CNPPD1Q9BV87 410 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 NECTIN3Q9NQS3 549 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 MKS1Q9NXB0 559 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 ANGPT4Q9Y264 503 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 PPEF2O14830 753 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 UGT2B11O75310 529 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF806P0C7X5 589 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 PTPN2P17706 415 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 SLC6A2P23975 617 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 CORO1AP31146 461 aaKnown RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 ETV3P41162 512 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 MTPNP58546 118 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 LYPLAL1Q5VWZ2 237 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 KIAA0930Q6ICG6 404 aaPredicted RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 CERS6Q6ZMG9 384 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 MFSD2AQ8NA29 543 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 DHRS9Q9BPW9 319 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 ASAH2Q9NR71 780 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 SLIT2O94813 1529 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 IL4RP24394 825 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 GABRR2P28476 465 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 NTSP30990 170 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 RFC2P35250 354 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 GLUD2P49448 558 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 PTSQ03393 145 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 SLC10A2Q12908 348 aaPredicted RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 PUS10Q3MIT2 529 aaKnown RBP15.75■□□□□ 0.11
NPHP3-201ENST00000337331 NCBP2-AS2Q69YL0 99 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 TRIM40Q6P9F5 258 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 SLC24A5Q71RS6 500 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 USP7Q93009 1102 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 PCDHB1Q9Y5F3 818 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 TLL2Q9Y6L7 1015 aa15.75■□□□□ 0.11
NPHP3-201ENST00000337331 NPHS1O60500 1241 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 RAP2AP10114 183 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 TNNI3P19429 210 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 STX4Q12846 297 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 LAPTM4AQ15012 233 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 METTL4Q8N3J2 472 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ZUFSPQ96AP4 578 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 RHBGQ9H310 441 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ELOVL7A1L3X0 281 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 FABP12A6NFH5 140 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ARL5CA6NH57 179 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 A8MUA0 341 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ERP29P30040 261 aaKnown RBP15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ELP6Q0PNE2 266 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 COX10Q12887 443 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 UXS1Q8NBZ7 420 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 MRPL48Q96GC5 212 aaKnown RBP15.74■□□□□ 0.11
NPHP3-201ENST00000337331 MED28Q9H204 178 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 RBPJLQ9UBG7 517 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 EIF2B4Q9UI10 523 aaKnown RBP15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ASF1AQ9Y294 204 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 C10orf71Q711Q0 1435 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 WARSP23381 471 aaKnown RBP15.74■□□□□ 0.11
NPHP3-201ENST00000337331 HTR7P34969 479 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 CSNK2BP67870 215 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 CLEC20AQ6ZU45 233 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF438Q7Z4V0 828 aa15.74■□□□□ 0.11
NPHP3-201ENST00000337331 GLYATL1P3A0A0U1RQE8 302 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 QSOX1O00391 747 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 SDHDO14521 159 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CYP11A1P05108 521 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PIM1P11309 404 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CXCR2P25025 360 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 OXTRP30559 389 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 GSTM5P46439 218 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CD47Q08722 323 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 SERPINA13PQ6UXR4 307 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 DLK2Q6UY11 383 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 FAM83FQ8NEG4 500 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 NECTIN4Q96NY8 510 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 AARSD1Q9BTE6 412 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 NTN4Q9HB63 628 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RANGRFQ9HD47 186 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 SAMD4AQ9UPU9 718 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RNF6Q9Y252 685 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PCDHGB6Q9Y5F9 930 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 MAGED1Q9Y5V3 778 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 MYO5AQ9Y4I1 1855 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 ACOT8O14734 319 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 DNTTP04053 509 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CACTIN-AS1Q8N1I8 211 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 MMP28Q9H239 520 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CRISPLD1Q9H336 500 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PTPRJQ12913 1337 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 OR51F1A6NGY5 319 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 SSNA1O43805 119 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PRAMEF1O95521 474 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 TRBC1P01850 177 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 MT-ND2P03891 347 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 IL6P05231 212 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RPL3P39023 403 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 TAGLNQ01995 201 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms