RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 KIAA0408Q6ZU52 694 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 GALNT13Q8IUC8 556 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CXorf40BQ96DE9 158 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 TMEM245Q9H330 911 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 ALG2Q9H553 416 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CLEC4EQ9ULY5 219 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 OR51F1A6NGY5 319 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 TFECO14948 347 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 PENKP01210 267 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 PRKCHP24723 683 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 EIF2DP41214 584 aaKnown RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CHRNA6Q15825 494 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SNX20Q7Z614 316 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 HID1Q8IV36 788 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SMRP1Q8NCR6 262 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CENPNQ96H22 339 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 ZDBF2Q9HCK1 2354 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 RASGRP1O95267 797 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ALDOAP04075 364 aaKnown RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 IL12RB1P42701 662 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MAPK9P45984 424 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 PXNP49023 591 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 KRR1Q13601 381 aaKnown RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MANEALQ5VSG8 457 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ASZ1Q8WWH4 475 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 VWCEQ96DN2 955 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 FAM126AQ9BYI3 521 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MAGEE1Q9HCI5 957 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 EHD3Q9NZN3 535 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 HS3ST2Q9Y278 367 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 TSPAN6O43657 245 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 SLC22A3O75751 556 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ILF3Q12906 894 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MADCAM1Q13477 382 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CRY1Q16526 586 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 TMEM220Q6QAJ8 160 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 BEND7Q8N7W2 519 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 C12orf43Q96C57 262 aaKnown RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 COQ7Q99807 217 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 HOPXQ9BPY8 73 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ZSCAN5AQ9BUG6 496 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CHID1Q9BWS9 393 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 SIT1Q9Y3P8 196 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ATG2BQ96BY7 2078 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 A0A1W2PQU0 124 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 G3V2T6 193 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 SNPHO15079 494 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 SCAMP1O15126 338 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 RECQL5O94762 991 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 IL9P15248 144 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 S100A3P33764 101 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CD68P34810 354 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 TPTEP56180 551 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MERTKQ12866 999 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ABRQ12979 859 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CPSF7Q8N684 471 aaKnown RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CLHC1Q8NHS4 586 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 MCFD2Q8NI22 146 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 OMA1Q96E52 524 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 ASB2Q96Q27 587 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 TTYH1Q9H313 450 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-201ENST00000334136 OXSMQ9NWU1 459 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 CIDEBQ9UHD4 219 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
HDAC6-201ENST00000334136 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 HNRNPCL2B2RXH8 293 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PLK4O00444 970 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CFIP05156 583 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 NSG1P42857 185 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 RPS21P63220 83 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PTPRCAPQ14761 206 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CNSTQ6PJW8 725 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PRR23CQ6ZRP0 262 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 RTP4Q96DX8 246 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 OR2AG1Q9H205 316 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ARL15Q9NXU5 204 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 MARK1Q9P0L2 795 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SLC2A6Q9UGQ3 507 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CNOT6Q9ULM6 557 aaKnown RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ASF1AQ9Y294 204 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 IDO1P14902 403 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 IDSP22304 550 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SLC7A1P30825 629 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PTGER3P43115 390 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 RGRP47804 291 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 PLA2G4EQ3MJ16 856 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 CYP4V2Q6ZWL3 525 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-201ENST00000334136 AMER2Q8N7J2 671 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 OLIG1Q8TAK6 271 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
HDAC6-201ENST00000334136 SCAMP4Q969E2 229 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms