RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RHEBL1Q8TAI7 183 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 OR4K3Q96R72 315 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 TRIT1Q9H3H1 467 aaKnown RBP16.01■□□□□ 0.15
SHOX-201ENST00000334060 KIR3DX1Q9H7L2 352 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 INTS7Q9NVH2 962 aaKnown RBP16.01■□□□□ 0.15
SHOX-201ENST00000334060 DNAAF2Q9NVR5 837 aaKnown RBP16.01■□□□□ 0.15
SHOX-201ENST00000334060 NLGN3Q9NZ94 848 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 NCKIPSDQ9NZQ3 722 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 HCN4Q9Y3Q4 1203 aa16.01■□□□□ 0.15
SHOX-201ENST00000334060 A0A1W2PPV9 198 aa16■□□□□ 0.15
SHOX-201ENST00000334060 F8W8V4 182 aa16■□□□□ 0.15
SHOX-201ENST00000334060 EIF3FO00303 357 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 PRAMEF10O60809 474 aa16■□□□□ 0.15
SHOX-201ENST00000334060 KCNJ13O60928 360 aa16■□□□□ 0.15
SHOX-201ENST00000334060 VIPP01282 170 aa16■□□□□ 0.15
SHOX-201ENST00000334060 CATP04040 527 aaKnown RBP16■□□□□ 0.15
SHOX-201ENST00000334060 GSTA1P08263 222 aa16■□□□□ 0.15
SHOX-201ENST00000334060 GFAPP14136 432 aa16■□□□□ 0.15
SHOX-201ENST00000334060 EPORP19235 508 aa16■□□□□ 0.15
SHOX-201ENST00000334060 MPSTP25325 297 aa16■□□□□ 0.15
SHOX-201ENST00000334060 MAPK9P45984 424 aa16■□□□□ 0.15
SHOX-201ENST00000334060 SERPINB4P48594 390 aa16■□□□□ 0.15
SHOX-201ENST00000334060 OR1D5P58170 312 aa16■□□□□ 0.15
SHOX-201ENST00000334060 CFHR1Q03591 330 aa16■□□□□ 0.15
SHOX-201ENST00000334060 KRT33BQ14525 404 aa16■□□□□ 0.15
SHOX-201ENST00000334060 AASDHQ4L235 1098 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 KLC3Q6P597 504 aa16■□□□□ 0.15
SHOX-201ENST00000334060 TMPRSS9Q7Z410 1059 aa16■□□□□ 0.15
SHOX-201ENST00000334060 TBC1D21Q8IYX1 336 aa16■□□□□ 0.15
SHOX-201ENST00000334060 OR9A1PQ8NGU1 263 aa16■□□□□ 0.15
SHOX-201ENST00000334060 MAPK15Q8TD08 544 aa16■□□□□ 0.15
SHOX-201ENST00000334060 MAGEC3Q8TD91 643 aa16■□□□□ 0.15
SHOX-201ENST00000334060 IQCGQ9H095 443 aaKnown RBP16■□□□□ 0.15
SHOX-201ENST00000334060 KLHL25Q9H0H3 589 aa16■□□□□ 0.15
SHOX-201ENST00000334060 SSU72Q9NP77 194 aaKnown RBP16■□□□□ 0.15
SHOX-201ENST00000334060 TMEM9Q9P0T7 183 aa16■□□□□ 0.15
SHOX-201ENST00000334060 CSNK1G3Q9Y6M4 447 aa16■□□□□ 0.15
SHOX-201ENST00000334060 CPED1A4D0V7 1026 aa16■□□□□ 0.15
SHOX-201ENST00000334060 PCDHGA12O60330 932 aa16■□□□□ 0.15
SHOX-201ENST00000334060 LYPLA1O75608 230 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 FGF3P11487 239 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 CPA3P15088 417 aa16■□□□□ 0.15
SHOX-201ENST00000334060 BGNP21810 368 aa16■□□□□ 0.15
SHOX-201ENST00000334060 PRDX3P30048 256 aaKnown RBP16■□□□□ 0.15
SHOX-201ENST00000334060 DPP6P42658 865 aa16■□□□□ 0.15
SHOX-201ENST00000334060 GUCY1A3Q02108 690 aa16■□□□□ 0.15
SHOX-201ENST00000334060 PLOD1Q02809 727 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 NAE1Q13564 534 aa16■□□□□ 0.15
SHOX-201ENST00000334060 PTCHD3Q3KNS1 767 aa16■□□□□ 0.15
SHOX-201ENST00000334060 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
SHOX-201ENST00000334060 ZYG11AQ6WRX3 759 aa16■□□□□ 0.15
SHOX-201ENST00000334060 TRIM73Q86UV7 250 aa16■□□□□ 0.15
SHOX-201ENST00000334060 TRIM48Q8IWZ4 208 aa16■□□□□ 0.15
SHOX-201ENST00000334060 ARL10Q8N8L6 244 aa16■□□□□ 0.15
SHOX-201ENST00000334060 OR10G6Q8NH81 332 aa16■□□□□ 0.15
SHOX-201ENST00000334060 MED8Q96G25 268 aa16■□□□□ 0.15
SHOX-201ENST00000334060 FOPNLQ96NB1 174 aa16■□□□□ 0.15
SHOX-201ENST00000334060 STMN4Q9H169 189 aaPredicted RBP16■□□□□ 0.15
SHOX-201ENST00000334060 SYNPO2LQ9H987 977 aa16■□□□□ 0.15
SHOX-201ENST00000334060 RDH14Q9HBH5 336 aa16■□□□□ 0.15
SHOX-201ENST00000334060 ZBTB26Q9HCK0 441 aa16■□□□□ 0.15
SHOX-201ENST00000334060 LRIT1Q9P2V4 623 aa16■□□□□ 0.15
SHOX-201ENST00000334060 PTBP2Q9UKA9 531 aaKnown RBP16■□□□□ 0.15
SHOX-201ENST00000334060 CEP250Q9BV73 2442 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 E7ENX8 843 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 KLK8O60259 260 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 RBP1P09455 135 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 HOXB3P14651 431 aaPredicted RBP15.99■□□□□ 0.15
SHOX-201ENST00000334060 CYP2A7P20853 494 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 EEF1DP29692 281 aaKnown RBP15.99■□□□□ 0.15
SHOX-201ENST00000334060 ALDH4A1P30038 563 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 LSSP48449 732 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 TBPL1P62380 186 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 TAP2Q03519 686 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 SP140Q13342 867 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 PLCL1Q15111 1095 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 TMEM26Q6ZUK4 368 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 FBXO39Q8N4B4 442 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 PDPRQ8NCN5 879 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 BCAS4Q8TDM0 211 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 SETD7Q8WTS6 366 aaKnown RBP15.99■□□□□ 0.15
SHOX-201ENST00000334060 CCDC74AQ96AQ1 378 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 TSNARE1Q96NA8 513 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 EVA1BQ9NVM1 165 aa15.99■□□□□ 0.15
SHOX-201ENST00000334060 KIR2DS5A0A0G2JLQ3 304 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 A0A0G2JNG1 304 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 KLHL33A6NCF5 533 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 PROB1E7EW31 1015 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 KIR2DS3K7RE56 304 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 B4GAT1O43505 415 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 ITM2AO43736 263 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 BPGMP07738 259 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 POLR2CP19387 275 aaPredicted RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 MAP4P27816 1152 aaKnown RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 PKLRP30613 574 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 NAGLUP54802 743 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 KIR2DS5Q14953 304 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 PROX2Q3B8N5 592 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 UNC50Q53HI1 259 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms