RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SLC22A14Q9Y267 594 aa16.96■□□□□ 0.31
DDX28-201ENST00000332395 MYOCOSA0A1B0GUC4 107 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 CLPTM1O96005 669 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 CYP17A1P05093 508 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 UBE3AQ05086 875 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 ZNF284Q2VY69 593 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX28-201ENST00000332395 TBC1D21Q8IYX1 336 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 DTWD1Q8N5C7 304 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 L3MBTL4Q8NA19 623 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 LRIG1Q96JA1 1093 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 NSMCE2Q96MF7 247 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 C9orf16Q9BUW7 83 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 DNAJC11Q9NVH1 559 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 FAM8A1Q9UBU6 413 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 OAZ3Q9UMX2 235 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 MRPS23Q9Y3D9 190 aaKnown RBP16.95■□□□□ 0.3
DDX28-201ENST00000332395 TMEM202A6NGA9 273 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 ZNF197O14709 1029 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 SLCO2B1O94956 709 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 SRPRAP08240 638 aaKnown RBP16.95■□□□□ 0.3
DDX28-201ENST00000332395 CISD3P0C7P0 127 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 ITPKAP23677 461 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 NEK2P51955 445 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 TCEAL5Q5H9L2 206 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 TECPR1Q7Z6L1 1165 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 BTN2A2Q8WVV5 523 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 SEPHS2Q99611 448 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 MRPS26Q9BYN8 205 aaKnown RBP16.95■□□□□ 0.3
DDX28-201ENST00000332395 ATG10Q9H0Y0 220 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 PREBQ9HCU5 417 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 PRKAG2Q9UGJ0 569 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 DLGAP4Q9Y2H0 992 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 V9GYQ6 96 aa16.95■□□□□ 0.3
DDX28-201ENST00000332395 LINC01553A4QN01 128 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 PER2O15055 1255 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 TFAP2AP05549 437 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 ADH5P11766 374 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 MMP12P39900 470 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 RPS14P62263 151 aaKnown RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 PLOD1Q02809 727 aaPredicted RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 ATP6AP1Q15904 470 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 RASGRP3Q8IV61 690 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 RAVER1Q8IY67 606 aaKnown RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 ZNF707Q96C28 371 aaPredicted RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 ZNF583Q96ND8 569 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 ANKRD60Q9BZ19 345 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 CHCHD3Q9NX63 227 aaKnown RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 QSOX1O00391 747 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 VILLO15195 856 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 PRAMEF4O60810 478 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 GSTM1P09488 218 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 ELFN1P0C7U0 828 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 RPL5P46777 297 aaKnown RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 GSTM4Q03013 218 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 LDLRAP1Q5SW96 308 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 PRAMEF9Q5VWM5 478 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 PSRC1Q6PGN9 363 aaPredicted RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 C12orf40Q86WS4 652 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
DDX28-201ENST00000332395 ITFG1Q8TB96 612 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 HCAR2Q8TDS4 363 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 TFAP2CQ92754 450 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 VPS35Q96QK1 796 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 OR52E6Q96RD3 313 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 GALNT8Q9NY28 637 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 SLC25A37Q9NYZ2 338 aa16.94■□□□□ 0.3
DDX28-201ENST00000332395 RNF103-CHMP3A0A140T963 221 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 DLGAP1O14490 977 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 ACOX3O15254 700 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 TSPAN6O43657 245 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 MT-ND1P03886 318 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 ATP6V1B1P15313 513 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 GGT1P19440 569 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 PRPH2P23942 346 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 CTSCP53634 463 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 PFN3P60673 137 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 APOFQ13790 326 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 GRIN2CQ14957 1233 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 TMTC4Q5T4D3 741 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 KRT80Q6KB66 452 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 LIPIQ6XZB0 460 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 DNAJC14Q6Y2X3 702 aaPredicted RBP16.93■□□□□ 0.3
DDX28-201ENST00000332395 PARS2Q7L3T8 475 aaKnown RBP16.93■□□□□ 0.3
DDX28-201ENST00000332395 SPRED1Q7Z699 444 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 MSRB3Q8IXL7 192 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 RASGEF1AQ8N9B8 481 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 OR2T12Q8NG77 320 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 GLYATL1Q969I3 302 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 FBXL8Q96CD0 374 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 FAM83CQ9BQN1 747 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 THUMPD3Q9BV44 507 aaKnown RBP16.93■□□□□ 0.3
DDX28-201ENST00000332395 ITM2BQ9Y287 266 aa16.93■□□□□ 0.3
DDX28-201ENST00000332395 RWDD3Q9Y3V2 267 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms