RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 IGF2RP11717 2491 aa6.16□□□□□ -1.42
SMG1-201ENST00000330588 SDK2Q58EX2 2172 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 TRBV23OR9-2A0A075B6M9 112 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 OR52A4PA6NMU1 304 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 E7EVH7 732 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 F5H423 210 aaPredicted RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 IFRD1O00458 451 aaPredicted RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 KPNA5O15131 536 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 GPR39O43194 453 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 BUD23O43709 281 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 PEX14O75381 377 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 STK17BO94768 372 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ZBTB11O95625 1053 aaPredicted RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 OR56A5P0C7T3 313 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 MLNP12872 115 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 MSNP26038 577 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 DNAJA1P31689 397 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 CA5AP35218 305 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 STAT5AP42229 794 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 DRG2P55039 364 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 ADARP55265 1226 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 GFERP55789 205 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 HSD11B2P80365 405 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 OLIG2Q13516 323 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 BOP1Q14137 746 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 PTPRCAPQ14761 206 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 POU6F1Q14863 301 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 CYP1B1Q16678 543 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ZRANB3Q5FWF4 1079 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 PCID2Q5JVF3 399 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 CACHD1Q5VU97 1274 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ANKS6Q68DC2 871 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ARMC6Q6NXE6 501 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 PPP1R21Q6ZMI0 780 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 LRRC6Q86X45 466 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ZFAND4Q86XD8 727 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 ZNF761Q86XN6 746 aaPredicted RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 FAM129CQ86XR2 697 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 TBC1D21Q8IYX1 336 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 CACNA2D3Q8IZS8 1091 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 DNAAF3Q8N9W5 541 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 OR13J1Q8NGT2 312 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 GPR150Q8NGU9 434 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
SMG1-201ENST00000330588 ATG4AQ8WYN0 398 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 RSC1A1Q92681 617 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 RMDN2Q96LZ7 410 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 C12orf66Q96MD2 445 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 LRFN5Q96NI6 719 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 FAM118BQ9BPY3 351 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 CARD6Q9BX69 1037 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 WWP1Q9H0M0 922 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 POMT2Q9UKY4 750 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 PPP2R2CQ9Y2T4 447 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 TCAF1Q9Y4C2 921 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 CORINQ9Y5Q5 1042 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 MRFAP1Q9Y605 127 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 FAM208BQ5VWN6 2430 aa6.15□□□□□ -1.42
SMG1-201ENST00000330588 PKD1L2Q7Z442 2459 aa6.15□□□□□ -1.43
SMG1-201ENST00000330588 CEP295Q9C0D2 2601 aa6.15□□□□□ -1.43
SMG1-201ENST00000330588 SLC5A10A0PJK1 596 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 C21orf140B9A014 251 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 C1QL1O75973 258 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 BPNT1O95861 308 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 IFNB1P01574 187 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RPN2P04844 631 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RPS3P23396 243 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMG1-201ENST00000330588 SHMT2P34897 504 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RPL22P35268 128 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 MAPK9P45984 424 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LMAN1P49257 510 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TTPAP49638 278 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TUBB4BP68371 445 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SARNPP82979 210 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 PRKAA1Q13131 559 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TUBB2AQ13885 445 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SPARCL1Q14515 664 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SEPT7Q16181 437 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 TAF1BQ53T94 588 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 DNAJC21Q5F1R6 531 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 DNTTIP2Q5QJE6 756 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 TMTC4Q5T4D3 741 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PIANPQ8IYJ0 282 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SIDT2Q8NBJ9 832 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 PPHLN1Q8NEY8 458 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 OR52K1Q8NGK4 314 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 OR4L1Q8NH43 312 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TGM7Q96PF1 710 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TUBB2BQ9BVA1 445 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 KIFC1Q9BW19 673 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PITPNM3Q9BZ71 974 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TREX1Q9NSU2 369 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 OR6C2Q9NZP2 312 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 BFARQ9NZS9 450 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 KCND3Q9UK17 655 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RARRES3Q9UL19 164 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 AKAP13Q12802 2813 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 UBA6A0AVT1 1052 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 CCDC162PA2VCL2 907 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms