RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 OCMP0CE72 109 aaPredicted RBP15□□□□□ -0.01
BRCC3-201ENST00000330045 RPS14P62263 151 aaKnown RBP15□□□□□ -0.01
BRCC3-201ENST00000330045 CPSF6Q16630 551 aaKnown RBP eCLIP15□□□□□ -0.01
BRCC3-201ENST00000330045 DPY19L1Q2PZI1 675 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 LYPLAL1Q5VWZ2 237 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 MACC1Q6ZN28 852 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 DET1Q7L5Y6 550 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 HIPK1Q86Z02 1210 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 DCP2Q8IU60 420 aaKnown RBP15□□□□□ -0.01
BRCC3-201ENST00000330045 ARL10Q8N8L6 244 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 MUL1Q969V5 352 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 NODALQ96S42 347 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 CPPED1Q9BRF8 314 aaPredicted RBP15□□□□□ -0.01
BRCC3-201ENST00000330045 VN1R3Q9BXE9 311 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 SLC29A3Q9BZD2 475 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 PARVBQ9HBI1 364 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 ORC6Q9Y5N6 252 aa15□□□□□ -0.01
BRCC3-201ENST00000330045 GLYATL1P3A0A0U1RQE8 302 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 SEC24AO95486 1093 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 KRT6AP02538 564 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CXCL10P02778 98 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 KRT6BP04259 564 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 BMP1P13497 986 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 BPIP17213 487 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 IL1RNP18510 177 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 S100A3P33764 101 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CSKP41240 450 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 KRT6CP48668 564 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 GZMMP51124 257 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 RAD23AP54725 363 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 BCL2L1Q07817 233 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 NR1D2Q14995 579 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CHRNA6Q15825 494 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 TAF12Q16514 161 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 RFX4Q33E94 735 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 LRIF1Q5T3J3 769 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CRTC3Q6UUV7 619 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 HOMEZQ8IX15 550 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 C10orf111Q8N326 155 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 TMEM132CQ8N3T6 1108 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 ITFG2Q969R8 447 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 PYURFQ96I23 114 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 HTATIP2Q9BUP3 242 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 ACPTQ9BZG2 426 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 SERHLQ9NQF3 203 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 TMEFF2Q9UIK5 374 aaPredicted RBP14.99□□□□□ -0.01
BRCC3-201ENST00000330045 A0A096LPI6 279 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CFAP99D6REC4 459 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 SLC16A6O15403 523 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 DNAJB5O75953 348 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 IMPDH2P12268 514 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 HOXB6P17509 224 aaKnown RBP14.99□□□□□ -0.01
BRCC3-201ENST00000330045 PFKLP17858 780 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 HTR1BP28222 390 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 RYKP34925 604 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 HNF1BP35680 557 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 PSMD7P51665 324 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 MLLT10P55197 1068 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CLDN8P56748 225 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 SPCS2Q15005 226 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 TTLL9Q3SXZ7 439 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 CENPSQ8N2Z9 138 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 POP5Q969H6 163 aaKnown RBP14.99□□□□□ -0.01
BRCC3-201ENST00000330045 TMEM175Q9BSA9 504 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 RMND5AQ9H871 391 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 WBP1LQ9NX94 342 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 MTRRQ9UBK8 725 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 STOML2Q9UJZ1 356 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 MAN2B2Q9Y2E5 1009 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 DLGAP4Q9Y2H0 992 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 SCN8AQ9UQD0 1980 aa14.99□□□□□ -0.01
BRCC3-201ENST00000330045 PER2O15055 1255 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 BCAS1O75363 584 aaPredicted RBP14.98□□□□□ -0.01
BRCC3-201ENST00000330045 ARHGEF15O94989 841 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 PDYNP01213 254 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 GSNP06396 782 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 ANXA5P08758 320 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 MYCLP1P12525 358 aaPredicted RBP14.98□□□□□ -0.01
BRCC3-201ENST00000330045 ITIH1P19827 911 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 PCMT1P22061 227 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 NR4A1P22736 598 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 PLD1Q13393 1074 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 CDH18Q13634 790 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 SPIDRQ14159 915 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 GRAMD4Q6IC98 578 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 CES5AQ6NT32 575 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 SLC16A12Q6ZSM3 486 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 NAT16Q8N8M0 369 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 WFDC5Q8TCV5 224 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 BHMTQ93088 406 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 ALG14Q96F25 216 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 ITCHQ96J02 903 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 C19orf43Q9BQ61 176 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 CCDC90BQ9GZT6 254 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 TNKS2Q9H2K2 1166 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 EXD2Q9NVH0 621 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 PAK1IP1Q9NWT1 392 aaPredicted RBP14.98□□□□□ -0.01
BRCC3-201ENST00000330045 DNMT3BQ9UBC3 853 aaKnown RBP14.98□□□□□ -0.01
BRCC3-201ENST00000330045 COQ6Q9Y2Z9 468 aa14.98□□□□□ -0.01
BRCC3-201ENST00000330045 SH3GLB1Q9Y371 365 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms